RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 MICU2Q8IYU8 434 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 ST13P4Q8IZP2 240 aaPredicted RBP11.38□□□□□ -0.59
VPS16-206ENST00000466415 SHISA5Q8N114 240 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 NUP43Q8NFH3 380 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 ADCY4Q8NFM4 1077 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 WDR36Q8NI36 951 aaKnown RBP11.38□□□□□ -0.59
VPS16-206ENST00000466415 KAT2AQ92830 837 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 MR1Q95460 341 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 NCLNQ969V3 563 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 RBM18Q96H35 190 aaKnown RBP11.38□□□□□ -0.59
VPS16-206ENST00000466415 REXO5Q96IC2 774 aaKnown RBP11.38□□□□□ -0.59
VPS16-206ENST00000466415 RSRC1Q96IZ7 334 aaKnown RBP11.38□□□□□ -0.59
VPS16-206ENST00000466415 TAAR9Q96RI9 348 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 DDA1Q9BW61 102 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 TMEM121BQ9BXQ6 578 aaPredicted RBP11.38□□□□□ -0.59
VPS16-206ENST00000466415 ALOXE3Q9BYJ1 711 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 ASPSCR1Q9BZE9 553 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 DENND2DQ9H6A0 471 aaPredicted RBP11.38□□□□□ -0.59
VPS16-206ENST00000466415 LANCL2Q9NS86 450 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 PTGFRNQ9P2B2 879 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 GMPR2Q9P2T1 348 aaKnown RBP11.38□□□□□ -0.59
VPS16-206ENST00000466415 CTSFQ9UBX1 484 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 EGFL7Q9UHF1 273 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 RAPGEFL1Q9UHV5 662 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 MAGEL2Q9UJ55 1249 aa11.38□□□□□ -0.59
VPS16-206ENST00000466415 TMEM247A6NEH6 219 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 MEN1O00255 615 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 COQ9O75208 318 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 HEXBP07686 556 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 GPX2P18283 190 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 TNNI3P19429 210 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 RORAP35398 523 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 ETV5P41161 510 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 STT3AP46977 705 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 PRIM2P49643 509 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 OR4D2P58180 307 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 IGLV3-21P80748 117 aaPredicted RBP11.37□□□□□ -0.59
VPS16-206ENST00000466415 MRPS35P82673 323 aaKnown RBP11.37□□□□□ -0.59
VPS16-206ENST00000466415 RGNQ15493 299 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 ZNF628Q5EBL2 1059 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 VWA2Q5GFL6 755 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 MLIPQ5VWP3 458 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 CPZQ66K79 652 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 SPATA24Q86W54 205 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 PROSER1Q86XN7 944 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 C10orf67Q8IYJ2 551 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 SLC38A9Q8NBW4 561 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 HIPK4Q8NE63 616 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 BHLHE22Q8NFJ8 381 aaPredicted RBP11.37□□□□□ -0.59
VPS16-206ENST00000466415 STT3BQ8TCJ2 826 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 ZNF675Q8TD23 568 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 WDR60Q8WVS4 1066 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 FKBP10Q96AY3 582 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 PPWD1Q96BP3 646 aaKnown RBP11.37□□□□□ -0.59
VPS16-206ENST00000466415 ELP4Q96EB1 424 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 ZNF583Q96ND8 569 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 LRFN5Q96NI6 719 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 MS4A4EQ96PG1 132 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 TGIF2Q9GZN2 237 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 PCDHAC1Q9H158 963 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 NECTIN3Q9NQS3 549 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 CDV3Q9UKY7 258 aaKnown RBP11.37□□□□□ -0.59
VPS16-206ENST00000466415 MKL2Q9ULH7 1088 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 FAF1Q9UNN5 650 aaPredicted RBP11.37□□□□□ -0.59
VPS16-206ENST00000466415 ERVK-11Q9UQG0 969 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 B3GALT1Q9Y5Z6 326 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 GMEB1Q9Y692 573 aa11.37□□□□□ -0.59
VPS16-206ENST00000466415 COL27A1Q8IZC6 1860 aaPredicted RBP11.37□□□□□ -0.59
VPS16-206ENST00000466415 PLOD2O00469 737 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 ARPC2O15144 300 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 GFRA3O60609 400 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 BCAS2O75934 225 aaPredicted RBP11.36□□□□□ -0.59
VPS16-206ENST00000466415 STK17BO94768 372 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 IFI6P09912 130 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 ZGLP1P0C6A0 271 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 CEACAM1P13688 526 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 ETFAP13804 333 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 ZNF28P17035 718 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 MATN1P21941 496 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 CASP9P55211 416 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 DSTNP60981 165 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 ACTR3P61158 418 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 TXNL4AP83876 142 aaKnown RBP11.36□□□□□ -0.59
VPS16-206ENST00000466415 RHAGQ02094 409 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 LASP1Q14847 261 aaKnown RBP11.36□□□□□ -0.59
VPS16-206ENST00000466415 COX20Q5RI15 118 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 ZNF385CQ66K41 422 aaPredicted RBP11.36□□□□□ -0.59
VPS16-206ENST00000466415 TNFAIP8L2Q6P589 184 aaPredicted RBP11.36□□□□□ -0.59
VPS16-206ENST00000466415 MED25Q71SY5 747 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 OVCH1Q7RTY7 1134 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 GPR155Q7Z3F1 870 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 CALHM3Q86XJ0 350 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 VWA5B2Q8N398 1253 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 C11orf65Q8NCR3 313 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 OR7G2Q8NG99 324 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 METTL21AQ8WXB1 218 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 FIG4Q92562 907 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 RIT1Q92963 219 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 TSLPQ969D9 159 aa11.36□□□□□ -0.59
VPS16-206ENST00000466415 PMEPA1Q969W9 287 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms