RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 SLC6A5Q9Y345 797 aa3.19□□□□□ -1.9
PTPN12-210ENST00000464313 SMAD5-AS1Q9Y6J3 95 aa3.19□□□□□ -1.9
PTPN12-210ENST00000464313 DHX29Q7Z478 1369 aaKnown RBP3.19□□□□□ -1.9
PTPN12-210ENST00000464313 HCFC1P51610 2035 aa3.19□□□□□ -1.9
PTPN12-210ENST00000464313 FGD5Q6ZNL6 1462 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 NPC1L1Q9UHC9 1359 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 BCLAF3A2AJT9 711 aaKnown RBP3.18□□□□□ -1.9
PTPN12-210ENST00000464313 FOXI3A8MTJ6 420 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-210ENST00000464313 K7ERI5 159 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 TSPAN2O60636 221 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 HSF2BPO75031 334 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 SH3BGRLO75368 114 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 BCAS2O75934 225 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-210ENST00000464313 FCER2P06734 321 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 FCGR3AP08637 254 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 FCARP24071 287 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 MARCKSP29966 332 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-210ENST00000464313 MATKP42679 507 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 ALDH3B1P43353 468 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 ZNF239Q16600 458 aaKnown RBP3.18□□□□□ -1.9
PTPN12-210ENST00000464313 TCHHL1Q5QJ38 904 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-210ENST00000464313 ETFRF1Q6IPR1 90 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 ZNF774Q6NX45 483 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 ARMCX5Q6P1M9 558 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 DLEU7Q6UYE1 221 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 C1orf186Q6ZWK4 172 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 CEACAM19Q7Z692 300 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 ADAMTSL2Q86TH1 951 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 SLC22A16Q86VW1 577 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 LINC00518Q8N0U6 118 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 SUMF1Q8NBK3 374 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 TMEM185AQ8NFB2 350 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 OR52E1Q8NGJ3 308 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 OR6T1Q8NGN1 323 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 FBXO25Q8TCJ0 367 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 URGCPQ8TCY9 931 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 P3H4Q92791 437 aa3.18□□□□□ -1.9
PTPN12-210ENST00000464313 RPP25Q9BUL9 199 aaKnown RBP3.18□□□□□ -1.9
PTPN12-210ENST00000464313 TEX13AQ9BXU3 409 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-210ENST00000464313 RCOR3Q9P2K3 495 aaPredicted RBP3.18□□□□□ -1.9
PTPN12-210ENST00000464313 MRPS2Q9Y399 296 aaKnown RBP3.18□□□□□ -1.9
PTPN12-210ENST00000464313 A0A0U1RRA0 63 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 MCF2LO15068 1137 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 LRRTM2O43300 516 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 ZNF354AO60765 605 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-210ENST00000464313 ZNF253O75346 499 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 MT-ND3P03897 115 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 SERPINF2P08697 491 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 VDRP11473 427 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 ZNF18P17022 549 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 UCP1P25874 307 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 CALML3P27482 149 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 HMGCLP35914 325 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 NOVP48745 357 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 CCL11P51671 97 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 CASP9P55211 416 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 CCZ1BP86790 482 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 CCZ1P86791 482 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-210ENST00000464313 TSTA3Q13630 321 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-210ENST00000464313 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 HIGD2BQ4VC39 106 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 DDI2Q5TDH0 399 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 ASRGL1Q7L266 308 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 GPR142Q7Z601 462 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 P2RY8Q86VZ1 359 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 HPS6Q86YV9 775 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 LRRC49Q8IUZ0 686 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 EXOC6Q8TAG9 804 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 RDH11Q8TC12 318 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 NTNG2Q96CW9 530 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 CAPNS2Q96L46 248 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 PSMB7Q99436 277 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 NAP1L3Q99457 506 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-210ENST00000464313 SPAG8Q99932 426 aaPredicted RBP3.17□□□□□ -1.9
PTPN12-210ENST00000464313 DDX47Q9H0S4 455 aaKnown RBP3.17□□□□□ -1.9
PTPN12-210ENST00000464313 TRPV6Q9H1D0 765 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 Q9HAA7 133 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 DHRS4-AS1Q9P1J3 65 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 ARMCX1Q9P291 453 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 FAM153AQ9UHL3 310 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 TSPAN16Q9UKR8 245 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 KLHDC2Q9Y2U9 406 aa3.17□□□□□ -1.9
PTPN12-210ENST00000464313 MRPL11Q9Y3B7 192 aaKnown RBP3.17□□□□□ -1.9
PTPN12-210ENST00000464313 TRBV2A0A0J9YWF9 115 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 TMEM89A2RUT3 159 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 ZNF840PA6NDX5 716 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 RNF212BA8MTL3 300 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 E9PAM4 449 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 SYNGR4O95473 234 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 OAS1P00973 400 aaKnown RBP3.16□□□□□ -1.9
PTPN12-210ENST00000464313 GSTO1P78417 241 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 ABRAXAS2Q15018 415 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 ZKSCAN8Q15776 578 aaPredicted RBP3.16□□□□□ -1.9
PTPN12-210ENST00000464313 CLPPQ16740 277 aaPredicted RBP3.16□□□□□ -1.9
PTPN12-210ENST00000464313 C17orf58Q2M2W7 97 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 ANKRD55Q3KP44 614 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 ACER2Q5QJU3 275 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 REP15Q6BDI9 236 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 SPINK14Q6IE38 97 aa3.16□□□□□ -1.9
PTPN12-210ENST00000464313 PLBD1Q6P4A8 553 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms