RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	12.06	□□□□□ -0.48
SNHG17-208	ENST00000456953	FREM3	P0C091	2139 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	GSTM2	P28161	218 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	HPD	P32754	393 aa	Predicted RBP	12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	SLCO1A2	P46721	670 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	SERPINB9	P50453	376 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	SLC12A2	P55011	1212 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	LIM2	P55344	173 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	CASP8	Q14790	479 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	NHSL2	Q5HYW2	709 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	FAM45BP	Q6NSW5	357 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	LYPD8	Q6UX82	237 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	C20orf204	Q6ZNR8	217 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	FAM13C	Q8NE31	585 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	OR10G3	Q8NGC4	313 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	OR2W6P	Q8NHA6	318 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	FAM45A	Q8TCE6	357 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	ZNF721	Q8TF20	911 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	TMEM158	Q8WZ71	300 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	ZNF597	Q96LX8	424 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	SERINC2	Q96SA4	455 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	CSF3R	Q99062	836 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	RBBP8	Q99708	897 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	SFXN3	Q9BWM7	321 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	GSX2	Q9BZM3	304 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	FETUB	Q9UGM5	382 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	DAPP1	Q9UN19	280 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	TESMIN	Q9Y4I5	508 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	NPFFR2	Q9Y5X5	522 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	KCNE2	Q9Y6J6	123 aa		12.05	□□□□□ -0.48
SNHG17-208	ENST00000456953	NIN	Q8N4C6	2090 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	MYOCOS	A0A1B0GUC4	107 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	FAM95C	A0A1B0GW59	222 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	TLDC2	A0PJX2	215 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	ANKRD33B	A6NCL7	494 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	TRIM3	O75382	744 aa	Predicted RBP	12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	TRAPPC6A	O75865	159 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	ETHE1	O95571	254 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	GUCA1C	O95843	209 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	IFNA2	P01563	188 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	ENO2	P09104	434 aa	Predicted RBP	12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	FBXO45	P0C2W1	286 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	COX7A2	P14406	83 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	CNTF	P26441	200 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	SERPINB3	P29508	390 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	CDK9	P50750	372 aa	Known RBP	12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	PLA2G16	P53816	162 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	MTTP	P55157	894 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	IL2	P60568	153 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	RCAN2	Q14206	197 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	TBCEL	Q5QJ74	424 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	RBM20	Q5T481	1227 aa	Known RBP	12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	MROH9	Q5TGP6	573 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	HMBOX1	Q6NT76	420 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	PODNL1	Q6PEZ8	512 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	HDX	Q7Z353	690 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	LUZP2	Q86TE4	346 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	THOC6	Q86W42	341 aa	Known RBP	12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	C9orf106	Q8NAJ2	232 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	C7orf57	Q8NEG2	295 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	OR2L5	Q8NG80	312 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	PPP1R14C	Q8TAE6	165 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	EPS8L3	Q8TE67	593 aa	Known RBP	12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	ZFP3	Q96NJ6	502 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	UBTD1	Q9HAC8	227 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	ZNF180	Q9UJW8	692 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	CNOT11	Q9UKZ1	510 aa	Known RBP	12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	VWA7	Q9Y334	891 aa		12.04	□□□□□ -0.48
SNHG17-208	ENST00000456953	IQANK1	A0A1B0GTG1	560 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	IGKV3-11	P04433	115 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	HPN	P05981	417 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	CERS1	P27544	350 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	CDKN2D	P55273	166 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	POU4F1	Q01851	419 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	PDAP1	Q13442	181 aa	Known RBP	12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	ADPRM	Q3LIE5	342 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	TRIM40	Q6P9F5	258 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	TMIGD1	Q6UXZ0	262 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	C9orf40	Q8IXQ3	194 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	CNPY4	Q8N129	248 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	ZPLD1	Q8TCW7	415 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	DCAKD	Q8WVC6	231 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	CCT6B	Q92526	530 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	TSPAN17	Q96FV3	270 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	WDYHV1	Q96HA8	205 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	SENP5	Q96HI0	755 aa	Predicted RBP	12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	GPR22	Q99680	433 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	REXO4	Q9GZR2	422 aa	Known RBP	12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	UBQLN3	Q9H347	655 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	PIGM	Q9H3S5	423 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	COPS7B	Q9H9Q2	264 aa	Predicted RBP	12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	LYRM4	Q9HD34	91 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	TBK1	Q9UHD2	729 aa		12.03	□□□□□ -0.48
SNHG17-208	ENST00000456953	SLC22A14	Q9Y267	594 aa		12.03	□□□□□ -0.48

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