RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 GNB5O14775 395 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 SIAH2O43255 324 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 CNOT4O95628 575 aaKnown RBP21.17■□□□□ 0.98
PTPRA-208ENST00000455631 HSPA7P48741 367 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 DIO3P55073 304 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 SLAMF1Q13291 335 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 BIKQ13323 160 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 TGFBIQ15582 683 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 PDK4Q16654 411 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 HIST2H2ACQ16777 129 aaPredicted RBP21.17■□□□□ 0.98
PTPRA-208ENST00000455631 SPRED3Q2MJR0 410 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 TMEM35AQ53FP2 167 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 C18orf63Q68DL7 685 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 HIST2H2AA3Q6FI13 130 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 TRMT10BQ6PF06 316 aaKnown RBP21.17■□□□□ 0.98
PTPRA-208ENST00000455631 PLXDC2Q6UX71 529 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 YRDCQ86U90 279 aaKnown RBP21.17■□□□□ 0.98
PTPRA-208ENST00000455631 TCAIMQ8N3R3 496 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 FAM83FQ8NEG4 500 aaPredicted RBP21.17■□□□□ 0.98
PTPRA-208ENST00000455631 TANKQ92844 425 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 RIT1Q92963 219 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 ESAMQ96AP7 390 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 WDR34Q96EX3 536 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 PELOQ9BRX2 385 aaKnown RBP21.17■□□□□ 0.98
PTPRA-208ENST00000455631 SORBS1Q9BX66 1292 aaKnown RBP21.17■□□□□ 0.98
PTPRA-208ENST00000455631 PIGMQ9H3S5 423 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 CNOT10Q9H9A5 744 aaKnown RBP21.17■□□□□ 0.98
PTPRA-208ENST00000455631 NPFFR2Q9Y5X5 522 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 EXPH5Q8NEV8 1989 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 MED12Q93074 2177 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 ZANQ9Y493 2812 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 DSCAMO60469 2012 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 C2orf92A0A1B0GVN3 265 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 FAM95CA0A1B0GW59 222 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 DEFB108AA8MXU0 73 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 TAPBPO15533 448 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 CTIFO43310 598 aaKnown RBP21.16■□□□□ 0.98
PTPRA-208ENST00000455631 CRLF1O75462 422 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 RCBTB2O95199 551 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 ACTL6AO96019 429 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 TGFB1P01137 390 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 PCNAP12004 261 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 GCKP35557 465 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 TMED10P49755 219 aaKnown RBP21.16■□□□□ 0.98
PTPRA-208ENST00000455631 TNFRSF17Q02223 184 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 SRYQ05066 204 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 LAPTM5Q13571 262 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 HP1BP3Q5SSJ5 553 aaPredicted RBP21.16■□□□□ 0.98
PTPRA-208ENST00000455631 ZNF441Q8N8Z8 693 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 ZNF473Q8WTR7 871 aaKnown RBP21.16■□□□□ 0.98
PTPRA-208ENST00000455631 TMEM41AQ96HV5 264 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 ACBD3Q9H3P7 528 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 PLAC1Q9HBJ0 212 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 SNX15Q9NRS6 342 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 MS4A12Q9NXJ0 267 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 KLHL28Q9NXS3 571 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 PACSIN3Q9UKS6 424 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 STAB1Q9NY15 2570 aa21.16■□□□□ 0.98
PTPRA-208ENST00000455631 CLPSP04118 112 aa21.15■□□□□ 0.98
PTPRA-208ENST00000455631 PTPN6P29350 595 aa21.15■□□□□ 0.98
PTPRA-208ENST00000455631 CASP3P42574 277 aa21.15■□□□□ 0.98
PTPRA-208ENST00000455631 RPP38P78345 283 aaKnown RBP21.15■□□□□ 0.98
PTPRA-208ENST00000455631 IRF8Q02556 426 aa21.15■□□□□ 0.98
PTPRA-208ENST00000455631 HLA-DQA1Q5Y7H0 255 aa21.15■□□□□ 0.98
PTPRA-208ENST00000455631 SPC24Q8NBT2 197 aa21.15■□□□□ 0.98
PTPRA-208ENST00000455631 PPP1R14CQ8TAE6 165 aa21.15■□□□□ 0.98
PTPRA-208ENST00000455631 SECISBP2Q96T21 854 aaKnown RBP21.15■□□□□ 0.98
PTPRA-208ENST00000455631 ZNF226Q9NYT6 803 aa21.15■□□□□ 0.98
PTPRA-208ENST00000455631 PHF11Q9UIL8 331 aa21.15■□□□□ 0.98
PTPRA-208ENST00000455631 PSAT1Q9Y617 370 aa21.15■□□□□ 0.98
PTPRA-208ENST00000455631 MED12LQ86YW9 2145 aa21.14■□□□□ 0.98
PTPRA-208ENST00000455631 RNF212BA8MTL3 300 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 A8MXE2 369 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 SNPHO15079 494 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 STK16O75716 305 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 TLX1P31314 330 aaPredicted RBP21.14■□□□□ 0.97
PTPRA-208ENST00000455631 TAS2R39P59534 338 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 CHIT1Q13231 466 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 SETDB1Q15047 1291 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 TIGD3Q6B0B8 471 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 C20orf204Q6ZNR8 217 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 GPR180Q86V85 440 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 ZC3HC1Q86WB0 502 aaKnown RBP21.14■□□□□ 0.97
PTPRA-208ENST00000455631 OR1J4Q8NGS1 313 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 MS4A14Q96JA4 679 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 WFIKKN1Q96NZ8 548 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 CHMP2BQ9UQN3 213 aa21.14■□□□□ 0.97
PTPRA-208ENST00000455631 CPN1P15169 458 aa21.13■□□□□ 0.97
PTPRA-208ENST00000455631 SSTR4P31391 388 aa21.13■□□□□ 0.97
PTPRA-208ENST00000455631 GGT5P36269 586 aa21.13■□□□□ 0.97
PTPRA-208ENST00000455631 PTH2RP49190 550 aa21.13■□□□□ 0.97
PTPRA-208ENST00000455631 HNRNPH2P55795 449 aaKnown RBP21.13■□□□□ 0.97
PTPRA-208ENST00000455631 NRG3P56975 720 aa21.13■□□□□ 0.97
PTPRA-208ENST00000455631 PCDH1Q08174 1060 aa21.13■□□□□ 0.97
PTPRA-208ENST00000455631 CYP1B1Q16678 543 aa21.13■□□□□ 0.97
PTPRA-208ENST00000455631 KHDRBS2Q5VWX1 349 aaKnown RBP21.13■□□□□ 0.97
PTPRA-208ENST00000455631 OR4C11Q6IEV9 310 aa21.13■□□□□ 0.97
PTPRA-208ENST00000455631 ANGPTL8Q6UXH0 198 aa21.13■□□□□ 0.97
PTPRA-208ENST00000455631 PRR22Q8IZ63 422 aa21.13■□□□□ 0.97
PTPRA-208ENST00000455631 TRIM58Q8NG06 486 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms