RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 GIPRP48546 466 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 SMIM11AP58511 58 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 HSDL2Q6YN16 418 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 OLIG3Q7RTU3 272 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 TECPR1Q7Z6L1 1165 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 ZFP41Q8N8Y5 198 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 FAM181AQ8N9Y4 354 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 C19orf18Q8NEA5 215 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 OR52P1PQ8NH57 321 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 OR5P2Q8WZ92 322 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 ZNF558Q96NG5 402 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 ZNF582Q96NG8 517 aaPredicted RBP14.9□□□□□ -0.02
TRA2B-205ENST00000453386 F2RL3Q96RI0 385 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 FAM83CQ9BQN1 747 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 KATNB1Q9BVA0 655 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 TMEM245Q9H330 911 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 SLA2Q9H6Q3 261 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 AHSPQ9NZD4 102 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 NDRG2Q9UN36 371 aaKnown RBP14.9□□□□□ -0.02
TRA2B-205ENST00000453386 HMGN4O00479 90 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 MMP20O60882 483 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 ALX3O95076 343 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 LGI1O95970 557 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 PSKH1P11801 424 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 MMP11P24347 488 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 WNT4P56705 351 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 SYPL1Q16563 259 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 LCN1P1Q5VSP4 162 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 ZER1Q7Z7L7 766 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 GLCCI1Q86VQ1 547 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 IQCHQ86VS3 1027 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 ADGRF3Q8IZF5 1079 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 OR7G1Q8NGA0 311 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 OR4K5Q8NGD3 323 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 UBE2E3Q969T4 207 aa14.9□□□□□ -0.02
TRA2B-205ENST00000453386 OTUB1Q96FW1 271 aaPredicted RBP14.9□□□□□ -0.02
TRA2B-205ENST00000453386 TREX2Q9BQ50 279 aaPredicted RBP14.9□□□□□ -0.02
TRA2B-205ENST00000453386 POLDIP3Q9BY77 421 aaKnown RBP14.9□□□□□ -0.02
TRA2B-205ENST00000453386 THSD7BQ9C0I4 1608 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 WASH3PC4AMC7 463 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 PLPP1O14494 284 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 SLC30A4O14863 429 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 CPNE3O75131 537 aaKnown RBP14.89□□□□□ -0.03
TRA2B-205ENST00000453386 LRG1P02750 347 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 ALPPP05187 535 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 EPHX1P07099 455 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 CTSLP07711 333 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 OR12D1P0DN82 309 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 MAN2A2P49641 1150 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.89□□□□□ -0.031e-7■■■■■ 32.6
TRA2B-205ENST00000453386 RNLSQ5VYX0 342 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 TRIQKQ629K1 86 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 LHX8Q68G74 356 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 SYCE2Q6PIF2 218 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 LIPIQ6XZB0 460 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 SHFQ7M4L6 423 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 ADIPOR2Q86V24 386 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 CADM2Q8N3J6 435 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 AP3S1Q92572 193 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 TRPC4Q9UBN4 977 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 GPR52Q9Y2T5 361 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 CASKO14936 926 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 B4GALT2O60909 372 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 TP53P04637 393 aaPredicted RBP14.89□□□□□ -0.03
TRA2B-205ENST00000453386 CCNYL3P0C7X3 344 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 SLC2A2P11168 524 aaPredicted RBP14.89□□□□□ -0.03
TRA2B-205ENST00000453386 IRS1P35568 1242 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 GALK2Q01415 458 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 PLK5Q496M5 336 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 YIF1BQ5BJH7 314 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 TMEM215Q68D42 235 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 OR5D16Q8NGK9 328 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 TM9SF4Q92544 642 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 SLC9A6Q92581 669 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 ZNF689Q96CS4 500 aaPredicted RBP14.89□□□□□ -0.03
TRA2B-205ENST00000453386 GDF15Q99988 308 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 MCOLN1Q9GZU1 580 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 A4GNTQ9UNA3 340 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 GSTK1Q9Y2Q3 226 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 DNMT3AQ9Y6K1 912 aaPredicted RBP14.89□□□□□ -0.03
TRA2B-205ENST00000453386 CLCA3PQ9Y6N3 262 aa14.89□□□□□ -0.03
TRA2B-205ENST00000453386 NR2F1P10589 423 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 TYRP14679 529 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 NNMTP40261 264 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 MLLT3P42568 568 aaPredicted RBP14.88□□□□□ -0.03
TRA2B-205ENST00000453386 TATDN3Q17R31 274 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 CCDC58Q4VC31 144 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 KLHL22Q53GT1 634 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 PRAMEF14Q5SWL7 426 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 PRAMEF13Q5VWM6 474 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 KRT78Q8N1N4 520 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 Q8N402 240 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 YIPF7Q8N8F6 280 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 GRPEL2Q8TAA5 225 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 RAET1EQ8TD07 263 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 JPH3Q8WXH2 748 aaPredicted RBP14.88□□□□□ -0.03
TRA2B-205ENST00000453386 KCNK12Q9HB15 430 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 TESQ9UGI8 421 aaKnown RBP14.88□□□□□ -0.03
TRA2B-205ENST00000453386 IL12RB1P42701 662 aa14.88□□□□□ -0.03
TRA2B-205ENST00000453386 CCT3P49368 545 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms