RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 NUP205Q92621 2012 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 FOXJ1Q92949 421 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 NT5C3BQ969T7 300 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CHRDL1Q9BU40 450 aa8.6□□□□□ -1.03
NIPBL-202ENST00000448238 TESQ9UGI8 421 aaKnown RBP8.6□□□□□ -1.03
NIPBL-202ENST00000448238 CTRB1P17538 263 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 MPSTP25325 297 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 CTRB2Q6GPI1 263 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 METTL7BQ6UX53 244 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 KDM8Q8N371 416 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 OR9K2Q8NGE7 335 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 TANKQ92844 425 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 PYCR2Q96C36 320 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 SSU72Q9NP77 194 aaKnown RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 CUTCQ9NTM9 273 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 DNMBPQ6XZF7 1577 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 PRAMEF22A3QJZ6 481 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 SLC22A31A6NKX4 558 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ZNF736B4DX44 427 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ESR1P03372 595 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 CPN1P15169 458 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ADH7P40394 386 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 LCN6P62502 163 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ITPRIPL2Q3MIP1 535 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 TICAM1Q8IUC6 712 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 SULF2Q8IWU5 870 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 MINDY1Q8N5J2 469 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ACTL8Q9H568 366 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 AMBNQ9NP70 447 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 VPS29Q9UBQ0 182 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 B3GNT3Q9Y2A9 372 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 TRIOBPQ9H2D6 2365 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 KIAA2026Q5HYC2 2103 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 H0YAE9 185 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 VEGFDO43915 354 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 FPR1P21462 350 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 MLLT3P42568 568 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 CLCN3P51790 818 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ADIRFQ15847 76 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 LRRC73Q5JTD7 316 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 SPOCK2Q92563 424 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 MICU1Q9BPX6 476 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 SRRQ9GZT4 340 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 PHOX2AO14813 284 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 EGFP01133 1207 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 GMPRP36959 345 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 TAGLNQ01995 201 aaKnown RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ODF4Q2M2E3 257 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 SFRP5Q5T4F7 317 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 CEACAM20Q6UY09 585 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 AMZ2Q86W34 360 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ANKRD13BQ86YJ7 626 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 DCP2Q8IU60 420 aaKnown RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 RBMXL3Q8N7X1 1067 aaKnown RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ZCCHC10Q8TBK6 192 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 FNDC8Q8TC99 324 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 LMX1AQ8TE12 382 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 RASD2Q96D21 266 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 BTN2A3PQ96KV6 586 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 MS4A12Q9NXJ0 267 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 TBX22Q9Y458 520 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 PCDHAC2Q9Y5I4 1007 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 NEMP2A6NFY4 417 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 SH2D7A6NKC9 451 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ACOT7O00154 380 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 DPM1O60762 260 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 PKLRP30613 574 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 WNT3AP56704 352 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 UBE2NP61088 152 aaKnown RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 SRPXP78539 464 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 GALNT1Q10472 559 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 PGM5Q15124 567 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 BTNL8Q6UX41 500 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 NPRL2Q8WTW4 380 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ISOC1Q96CN7 298 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 OR8D2Q9GZM6 311 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 LRRC4CQ9HCJ2 640 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 TMEM39AQ9NV64 488 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 RNF24Q9Y225 148 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 PTPRZ1P23471 2315 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 TCOF1Q13428 1488 aaKnown RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 FAM170BA6NMN3 283 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 EIF3FO00303 357 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 MAP2K7O14733 419 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 NFATC1O95644 943 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 DHRS4L1P0CG22 281 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 HLA-EP13747 358 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 SREBF1P36956 1147 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 HSPA7P48741 367 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 CDKN1CP49918 316 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 DLX5P56178 289 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 TMEM71Q6P5X7 295 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 PHOSPHO1Q8TCT1 267 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 FAM46AQ96IP4 442 aaKnown RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 NDFIP1Q9BT67 221 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 OR51I1Q9H343 314 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 AGO3Q9H9G7 860 aaKnown RBP8.59□□□□□ -1.03
NIPBL-202ENST00000448238 FZD4Q9ULV1 537 aa8.59□□□□□ -1.03
NIPBL-202ENST00000448238 ASXL2Q76L83 1435 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms