RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 RTP4Q96DX8 246 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 CHFRQ96EP1 664 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 OR8D2Q9GZM6 311 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 SDR39U1Q9NRG7 319 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 PARPBPQ9NWS1 579 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM181Q9P2C4 612 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 A0A1W2PQL4 384 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 LYRM1O43325 122 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 RAD51DO75771 328 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 BPNT1O95861 308 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 PLATP00750 562 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 H2BFMP0C1H6 154 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 PFKLP17858 780 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 RAB3BP20337 219 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 S100PP25815 95 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 GNRHRP30968 328 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 CNR2P34972 360 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 CASRP41180 1078 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 SLC11A1P49279 550 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ARSDP51689 593 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 GPR143P51810 404 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 SNRPD2P62316 118 aaKnown RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 RNASE10Q5GAN6 216 aaKnown RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ARHGAP11AQ6P4F7 1023 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 TLDC1Q6P9B6 456 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 FAM198BQ6UWH4 519 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 C15orf39Q6ZRI6 1047 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 NAXEQ8NCW5 288 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 OR4K5Q8NGD3 323 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 OR2T35Q8NGX2 323 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM234Q8WY98 164 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 SLC29A1Q99808 456 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 G6PC3Q9BUM1 346 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 PTGES2Q9H7Z7 377 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 METTL7AQ9H8H3 244 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 DUOX1Q9NRD9 1551 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ZDHHC7Q9NXF8 308 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 PCTPQ9UKL6 214 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ENPP4Q9Y6X5 453 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 C1orf226A1L170 272 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 G3V2L1 256 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 LCKP06239 509 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ERCC1P07992 297 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 PIM1P11309 404 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ETFAP13804 333 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF16P17020 682 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 GABRA3P34903 492 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 SOX9P48436 509 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 KCNC1P48547 511 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF41P51814 821 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ART1P52961 327 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 TBC1D25Q3MII6 688 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 LY6G5CQ5SRR4 150 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 C1orf220Q5T0J3 134 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 REM2Q8IYK8 340 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 TRAM1L1Q8N609 369 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 FBXO27Q8NI29 283 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 HMGB4Q8WW32 186 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 SMARCD2Q92925 531 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 EIF5A2Q9GZV4 153 aaKnown RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ASB6Q9NWX5 421 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 NUFIP1Q9UHK0 495 aaKnown RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 INSL5Q9Y5Q6 135 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 UPK1BO75841 260 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 GDI1P31150 447 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 RORAP35398 523 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 CDK5R2Q13319 367 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 CCL14Q16627 93 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 PDSS1Q5T2R2 415 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 LRIF1Q5T3J3 769 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 SFRP4Q6FHJ7 346 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM205Q6UW68 189 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 TMPRSS9Q7Z410 1059 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 GPAT4Q86UL3 456 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ZSCAN4Q8NAM6 433 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 OR6C4Q8NGE1 309 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 OR52N2Q8NGI0 321 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 FRS2Q8WU20 508 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 SLA2Q9H6Q3 261 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 CERS4Q9HA82 394 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF701Q9NV72 531 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM45AQ9NWC5 275 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 KRBA1A5PL33 1030 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ANHXE9PGG2 379 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 C11orf98E9PRG8 122 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 SCAMP2O15127 329 aaKnown RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 INHAP05111 366 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 OSMP13725 252 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 DRD2P14416 443 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 CA5AP35218 305 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ACTBP60709 375 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 TBPL1P62380 186 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 ACTG1P63261 375 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 PRKCZQ05513 592 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 EIF4HQ15056 248 aaKnown RBP7.43□□□□□ -1.22
NEDD9-204ENST00000448183 NKAPLQ5M9Q1 402 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 C3orf33Q6P1S2 294 aa7.43□□□□□ -1.22
NEDD9-204ENST00000448183 IGFN1Q86VF2 1251 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms