RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ADH1BP00325 375 aa15.83■□□□□ 0.13
TCOF1-206ENST00000445265 HLA-FP30511 346 aa15.83■□□□□ 0.13
TCOF1-206ENST00000445265 RPS26P11Q5JNZ5 115 aaPredicted RBP15.83■□□□□ 0.13
TCOF1-206ENST00000445265 OR52P1PQ8NH57 321 aa15.83■□□□□ 0.13
TCOF1-206ENST00000445265 WDR48Q8TAF3 677 aa15.83■□□□□ 0.13
TCOF1-206ENST00000445265 VMP1Q96GC9 406 aa15.83■□□□□ 0.13
TCOF1-206ENST00000445265 S100A13Q99584 98 aa15.83■□□□□ 0.13
TCOF1-206ENST00000445265 HSPB11Q9Y547 144 aa15.83■□□□□ 0.13
TCOF1-206ENST00000445265 WWP2O00308 870 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 GNB5O14775 395 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 PAK4O96013 591 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-206ENST00000445265 ARAFP10398 606 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 STOMP27105 288 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 ARPC4P59998 168 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 SLC5A12Q1EHB4 618 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 C2orf27AQ580R0 203 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 DESI1Q6ICB0 168 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 C1orf216Q8TAB5 229 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 FANK1Q8TC84 345 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 MROQ9BYG7 248 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 AMBRA1Q9C0C7 1298 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 SLC6A16Q9GZN6 736 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 SACM1LQ9NTJ5 587 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 ANKMY1Q9P2S6 941 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 FKBP7Q9Y680 259 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 ADRB3P13945 408 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 TIMP2P16035 220 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 HK1P19367 917 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 RAB28P51157 221 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 WNT4P56705 351 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 KDM4DQ6B0I6 523 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 ACBD7Q8N6N7 88 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 TMEM246Q9BRR3 403 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 DPH7Q9BTV6 452 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 LINC00597Q9H2U6 94 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 PSORS1C1Q9UIG5 152 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 ASB1Q9Y576 335 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 FOXE1O00358 373 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-206ENST00000445265 BMP4P12644 408 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 NDUFV2P19404 249 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 PIN1Q13526 163 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-206ENST00000445265 NDUFAF5Q5TEU4 345 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 GPALPP1Q8IXQ4 340 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 OCEL1Q9H607 264 aa15.83■□□□□ 0.12
TCOF1-206ENST00000445265 ZNF334Q9HCZ1 680 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-206ENST00000445265 ELOA3DA6NLF2 546 aaPredicted RBP15.82■□□□□ 0.12
TCOF1-206ENST00000445265 C1orf105O95561 183 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 EDNRAP25101 427 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 STARP49675 285 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 ELOA3BQ3SY89 546 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 RIMKLAQ8IXN7 391 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 GPR135Q8IZ08 494 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 ELOA3Q8NG57 546 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 RFT1Q96AA3 541 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 SLC46A2Q9BY10 475 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 IL37Q9NZH6 218 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 PFDN2Q9UHV9 154 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 PADI2Q9Y2J8 665 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 PRKCDQ05655 676 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 FPGSQ05932 587 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 MRPL58Q14197 206 aaKnown RBP15.82■□□□□ 0.12
TCOF1-206ENST00000445265 TMEM107Q6UX40 140 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 ACOT12Q8WYK0 555 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 DTD2Q96FN9 168 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 ZNF354BQ96LW1 612 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 MTG2Q9H4K7 406 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 FBXL21Q9UKT6 434 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 ZFR2Q9UPR6 939 aaKnown RBP15.82■□□□□ 0.12
TCOF1-206ENST00000445265 CD2P06729 351 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 ACPPP15309 386 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 CSF2RAP15509 400 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 SAMD12Q8N8I0 201 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 OR5AR1Q8NGP9 310 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 SIPA1Q96FS4 1042 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 LGR4Q9BXB1 951 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 EIF3KQ9UBQ5 218 aaKnown RBP15.82■□□□□ 0.12
TCOF1-206ENST00000445265 A0A1W2PQL4 384 aaPredicted RBP15.82■□□□□ 0.12
TCOF1-206ENST00000445265 M0R129 80 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 MID1O15344 667 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 ARHGAP19Q14CB8 494 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 IQCF1Q8N6M8 205 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 CLCA3PQ9Y6N3 262 aa15.82■□□□□ 0.12
TCOF1-206ENST00000445265 COL11A2P13942 1736 aaPredicted RBP15.81■□□□□ 0.12
TCOF1-206ENST00000445265 IL7P13232 177 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 CFL1P23528 166 aaKnown RBP15.81■□□□□ 0.12
TCOF1-206ENST00000445265 TM4SF4P48230 202 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 HNRNPFP52597 415 aaKnown RBP15.81■□□□□ 0.12
TCOF1-206ENST00000445265 RHAGQ02094 409 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 FAM180BQ6P0A1 224 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 HMGN2P46Q86SG4 172 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 PEG10Q86TG7 708 aaKnown RBP15.81■□□□□ 0.12
TCOF1-206ENST00000445265 SLC22A12Q96S37 553 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 PKMYT1Q99640 499 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 TTYH1Q9H313 450 aaPredicted RBP15.81■□□□□ 0.12
TCOF1-206ENST00000445265 C5AR2Q9P296 337 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 PCDH17O14917 1159 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 FLRT2O43155 660 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 IFNA7P01567 189 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 PDHA2P29803 388 aa15.81■□□□□ 0.12
TCOF1-206ENST00000445265 GDI1P31150 447 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms