RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 CRISP3P54108 245 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 ISL1P61371 349 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 RUNX2Q13950 521 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 GPR19Q15760 415 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 DUSP7Q16829 419 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 C6orf141Q5SZD1 244 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 SLC36A4Q6YBV0 504 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 GALNT5Q7Z7M9 940 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 SLC44A2Q8IWA5 706 aaPredicted RBP17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 LGI4Q8N135 537 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 LRRC25Q8N386 305 aaPredicted RBP17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 SDR16C5Q8N3Y7 309 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 TTC29Q8NA56 475 aaPredicted RBP17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 CHDHQ8NE62 594 aaPredicted RBP17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 OR4K14Q8NGD5 310 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 APOBEC4Q8WW27 367 aaKnown RBP17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 XAGE5Q8WWM1 108 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 APOL4Q9BPW4 351 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 BTBD2Q9BX70 525 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 NTMQ9P121 344 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 SH3GLB1Q9Y371 365 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 SLC22A7Q9Y694 548 aa17.77■□□□□ 0.44
SEMA3D-202ENST00000444867 HMGN2P05204 90 aaKnown RBP17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 ETS2P15036 469 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 CDH12P55289 794 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 CD47Q08722 323 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 MICAQ29983 383 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 ZNF750Q32MQ0 723 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 ZNF773Q6PK81 442 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 TMEM107Q6UX40 140 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 SIX5Q8N196 739 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 NUP43Q8NFH3 380 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 OR10G2Q8NGC3 310 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 CLDN23Q96B33 292 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 SPACA7Q96KW9 195 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 ZNF354BQ96LW1 612 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 TREX2Q9BQ50 279 aaPredicted RBP17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 NPLQ9BXD5 320 aaPredicted RBP17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 GABARAPL3Q9BY60 117 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 KLHL25Q9H0H3 589 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 SEC14L3Q9UDX4 400 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 COMMD3-BMI1R4GMX3 469 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 A0A0G2JPF8 293 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 PRAMEF27A3QJZ7 478 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 ARRDC5A6NEK1 342 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 LILRA5A6NI73 299 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 HNRNPCL2B2RXH8 293 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 HNRNPCL3B7ZW38 293 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 E9PQ18 207 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 RECKO95980 971 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 HNRNPCL4P0DMR1 293 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 PAX7P23759 505 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 CRHBPP24387 322 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 TTKP33981 857 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 LIMS1P48059 325 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 CLK3P49761 638 aaKnown RBP17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 PRKAG1P54619 331 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 SH3BGRP55822 239 aaPredicted RBP17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 IL1RL1Q01638 556 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 LASP1Q14847 261 aaKnown RBP17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 SYPL1Q16563 259 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 USP53Q70EK8 1073 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 DGLUCYQ7Z3D6 616 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 CSNK1A1LQ8N752 337 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 GPR32P1Q8NGA4 272 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 OR5D16Q8NGK9 328 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 OR9A2Q8NGT5 310 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 ZNF566Q969W8 418 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 MAGED4Q96JG8 741 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 COL21A1Q96P44 957 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 PITX2Q99697 317 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 ACER3Q9NUN7 267 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 KCND3Q9UK17 655 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 NDRG4Q9ULP0 352 aaKnown RBP17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 DOLKQ9UPQ8 538 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 LIPT1Q9Y234 373 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 GMPPBQ9Y5P6 360 aa17.76■□□□□ 0.43
SEMA3D-202ENST00000444867 UBXN7O94888 489 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 CCDC159P0C7I6 412 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 POLR2IP36954 125 aaKnown RBP17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 MC3RP41968 323 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 XKP51811 444 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 RPL6Q02878 288 aaKnown RBP17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 NPRL3Q12980 569 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 PUM1Q14671 1186 aaKnown RBP eCLIP17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 EXOC3L2Q2M3D2 409 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 BROXQ5VW32 411 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 TSPYL5Q86VY4 417 aaPredicted RBP17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 ALDH16A1Q8IZ83 802 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 ARL14Q8N4G2 192 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 DEFB119Q8N690 84 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 LMX1AQ8TE12 382 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 CCDC3Q9BQI4 270 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 ADNPQ9H2P0 1102 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 CALML5Q9NZT1 146 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 POFUT2Q9Y2G5 429 aa17.75■□□□□ 0.43
SEMA3D-202ENST00000444867 GADD45GO95257 159 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 AGR2O95994 175 aa17.74■□□□□ 0.43
SEMA3D-202ENST00000444867 EIF2S1P05198 315 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms