RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ELAVL1Q15717 326 aaKnown RBP8.15□□□□□ -1.1
USP6NL-203ENST00000443016 KRTCAP3Q53RY4 240 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 GTF2H2CQ6P1K8 395 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 CYP4Z2PQ8N1L4 340 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 TMEM132CQ8N3T6 1108 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 ACOT4Q8N9L9 421 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 TMEM52Q8NDY8 209 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 NFAM1Q8NET5 270 aaPredicted RBP8.15□□□□□ -1.1
USP6NL-203ENST00000443016 ZNF483Q8TF39 744 aaPredicted RBP8.15□□□□□ -1.1
USP6NL-203ENST00000443016 CHMP6Q96FZ7 201 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 SCMH1Q96GD3 660 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 QRFPRQ96P65 431 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 MTERF1Q99551 399 aaKnown RBP8.15□□□□□ -1.1
USP6NL-203ENST00000443016 MS4A8Q9BY19 250 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 ALOXE3Q9BYJ1 711 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 OR51B5Q9H339 312 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 PRDM7Q9NQW5 492 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 FOXD3Q9UJU5 478 aaPredicted RBP8.15□□□□□ -1.1
USP6NL-203ENST00000443016 ERVK-11Q9UQG0 969 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 CSMD1Q96PZ7 3565 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 CYR61O00622 381 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 CDK2AP1O14519 115 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 LDB3O75112 727 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 CRCPO75575 148 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 ZFAND5O76080 213 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 OTCP00480 354 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 HIST1H1TP22492 207 aaPredicted RBP8.15□□□□□ -1.1
USP6NL-203ENST00000443016 CPN2P22792 545 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 HLCSP50747 726 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 CCNG1P51959 295 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 HK2P52789 917 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 PKNOX1P55347 436 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 PHEXP78562 749 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 CLCQ05315 142 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 GALNT1Q10472 559 aaPredicted RBP8.15□□□□□ -1.1
USP6NL-203ENST00000443016 KHDRBS2Q5VWX1 349 aaKnown RBP8.15□□□□□ -1.1
USP6NL-203ENST00000443016 ZNF787Q6DD87 383 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 HSDL2Q6YN16 418 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 GOLGA7Q7Z5G4 137 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 CPSF7Q8N684 471 aaKnown RBP8.15□□□□□ -1.1
USP6NL-203ENST00000443016 HUS1BQ8NHY5 278 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 FBXO27Q8NI29 283 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 REPS1Q96D71 796 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 C7orf26Q96N11 449 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 MAPKAP1Q9BPZ7 522 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 OR8D2Q9GZM6 311 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 LYRM4Q9HD34 91 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 ADGRE2Q9UHX3 823 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 SNX5Q9Y5X3 404 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 KLRC4-KLRK1H3BQV0 150 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 DYRK3O43781 588 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 TACC2O95359 2948 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 TROVE2P10155 538 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 PF4V1P10720 104 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 COX7A2P14406 83 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 ABOP16442 354 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 ATP5A1P25705 553 aaKnown RBP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 TLX1P31314 330 aaPredicted RBP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 ID2Q02363 134 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 SERTAD2Q14140 314 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 CPSF6Q16630 551 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 UNC50Q53HI1 259 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 GRHL2Q6ISB3 625 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 MZT2BQ6NZ67 158 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 MTFR2Q6P444 385 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF793Q6ZN11 406 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 FAM47EQ6ZV65 393 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 LAS2Q8IYD9 372 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 NKAIN3Q8N8D7 197 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 STON2Q8WXE9 905 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 RGMAQ96B86 450 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 RBM18Q96H35 190 aaKnown RBP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 GPR137Q96N19 417 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 ZNF382Q96SR6 550 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 GSTO2Q9H4Y5 243 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 IPPKQ9H8X2 491 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 SEMA4BQ9NPR2 832 aaPredicted RBP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 COPS7AQ9UBW8 275 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 KLF13Q9Y2Y9 288 aaPredicted RBP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 ASPDHA6ND91 283 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 A8MVJ9 347 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 C17orf105B2RV13 164 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 PRSS44E7EML9 344 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 TGFBR3LH3BV60 316 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 TFECO14948 347 aaPredicted RBP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 ASNA1O43681 348 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 NME2P1O60361 137 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 SHOX2O60902 331 aaPredicted RBP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 SNNO75324 88 aaPredicted RBP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 OR2J2O76002 312 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 CHEK2O96017 543 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 NME2P22392 152 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 GALNSP34059 522 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 TRHRP34981 398 aaPredicted RBP8.14□□□□□ -1.11
USP6NL-203ENST00000443016 DCTP40126 519 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 CA7P43166 264 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 SSR4P51571 173 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 SLAMF1Q13291 335 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 DEPDC1Q5TB30 811 aa8.14□□□□□ -1.11
USP6NL-203ENST00000443016 LIPJQ5W064 366 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms