RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 RBM18Q96H35 190 aaKnown RBP21.55■■□□□ 1.04
CPSF4-204ENST00000436336 DGAT2Q96PD7 388 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 ECSITQ9BQ95 431 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 CD300AQ9UGN4 299 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 GPN3Q9UHW5 284 aaPredicted RBP21.55■■□□□ 1.04
CPSF4-204ENST00000436336 PACSIN3Q9UKS6 424 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 DMXL1Q9Y485 3027 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 SDK2Q58EX2 2172 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 IGKV3D-11A0A0A0MRZ8 115 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 MYOCOSA0A1B0GUC4 107 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 FAM149AA5PLN7 773 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 PRORSD1PA6NEY8 169 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 PLOD2O00469 737 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 DNAJA2O60884 412 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 PDE5AO76074 875 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 KRT75O95678 551 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 DLGAP3O95886 979 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 GPX2P18283 190 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 PTGER1P34995 402 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 PRICKLE4Q2TBC4 344 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 ZNF628Q5EBL2 1059 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 MLIPQ5VWP3 458 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 TMPRSS7Q7RTY8 843 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 GPR155Q7Z3F1 870 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 RNF148Q8N7C7 305 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 ADCY4Q8NFM4 1077 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 NEURL3Q96EH8 262 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 SPRY4Q9C004 299 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 ALG2Q9H553 416 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 EPS8L2Q9H6S3 715 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 KAT8Q9H7Z6 458 aaKnown RBP21.55■■□□□ 1.04
CPSF4-204ENST00000436336 AKIRIN1Q9H9L7 192 aaPredicted RBP21.55■■□□□ 1.04
CPSF4-204ENST00000436336 C3orf14Q9HBI5 128 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 DLL3Q9NYJ7 618 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 ACSL6Q9UKU0 697 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 MKL2Q9ULH7 1088 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 EMC8O43402 210 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 TNFSF15O95150 251 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 RECKO95980 971 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 ME2P23368 584 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 GALNSP34059 522 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 MC3RP41968 323 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 PRR5P85299 388 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 LIPEQ05469 1076 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 VAC14Q08AM6 782 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 SAXO2Q658L1 398 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 BHLHB9Q6PI77 547 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 C6orf15Q6UXA7 325 aaPredicted RBP21.54■■□□□ 1.04
CPSF4-204ENST00000436336 LAPTM4BQ86VI4 370 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 HPS6Q86YV9 775 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 PRSS58Q8IYP2 241 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 KAT2AQ92830 837 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 PPWD1Q96BP3 646 aaKnown RBP21.54■■□□□ 1.04
CPSF4-204ENST00000436336 VN1R1Q9GZP7 353 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 CHST8Q9H2A9 424 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 RAD21L1Q9H4I0 556 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 WDR54Q9H977 334 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 ZCCHC3Q9NUD5 404 aaKnown RBP21.54■■□□□ 1.04
CPSF4-204ENST00000436336 PTGFRNQ9P2B2 879 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 SLC7A8Q9UHI5 535 aa21.54■■□□□ 1.04
CPSF4-204ENST00000436336 NXT1Q9UKK6 140 aaKnown RBP21.54■■□□□ 1.04
CPSF4-204ENST00000436336 PTPRZ1P23471 2315 aaPredicted RBP21.53■■□□□ 1.04
CPSF4-204ENST00000436336 TEX51A0A1B0GUA7 166 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 C9J4A7 227 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 C1QCP02747 245 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 HSD17B1P14061 328 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 DMTNQ08495 405 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 FAM199XQ6PEV8 388 aaPredicted RBP21.53■■□□□ 1.04
CPSF4-204ENST00000436336 ANGPTL8Q6UXH0 198 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 C6orf120Q7Z4R8 191 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 OR56A1Q8NGH5 318 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 OR52N2Q8NGI0 321 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 PNPT1Q8TCS8 783 aaKnown RBP21.53■■□□□ 1.04
CPSF4-204ENST00000436336 POLR1BQ9H9Y6 1135 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 MAT2BQ9NZL9 334 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 FOXJ2Q9P0K8 574 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 NTMQ9P121 344 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 CNOT1A5YKK6 2376 aaKnown RBP21.53■■□□□ 1.04
CPSF4-204ENST00000436336 CEP250Q9BV73 2442 aa21.53■■□□□ 1.04
CPSF4-204ENST00000436336 TCRBV16S1A1N1A0A5B0 115 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 CYC1P08574 325 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 CCNYL3P0C7X3 344 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 GSK3BP49841 420 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 EFNA3P52797 238 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 MRPS35P82673 323 aaKnown RBP21.52■■□□□ 1.04
CPSF4-204ENST00000436336 FAM198BQ6UWH4 519 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 OR7G2Q8NG99 324 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 OR10A6Q8NH74 314 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 RIT1Q92963 219 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 TSLPQ969D9 159 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 CTHRC1Q96CG8 243 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 ZNF583Q96ND8 569 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 SPSB2Q99619 263 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 SOX17Q9H6I2 414 aaPredicted RBP21.52■■□□□ 1.04
CPSF4-204ENST00000436336 PADI1Q9ULC6 663 aa21.52■■□□□ 1.04
CPSF4-204ENST00000436336 A0A087WV62 115 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 CNOT3O75175 753 aaKnown RBP21.52■■□□□ 1.03
CPSF4-204ENST00000436336 SOX18P35713 384 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 MVDP53602 400 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 MGAT2Q10469 447 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms