RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 FAM219BQ5XKK7 198 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 C10orf107Q8IVU9 208 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 SRRM1Q8IYB3 904 aaKnown RBP17.08■□□□□ 0.32
MSH5-207ENST00000425703 SAMD14Q8IZD0 417 aaPredicted RBP17.08■□□□□ 0.32
MSH5-207ENST00000425703 GHDCQ8N2G8 530 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 C17orf47Q8NEP4 570 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 FAM76AQ8TAV0 307 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 TP53INP1Q96A56 240 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 APIPQ96GX9 242 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 METTL2AQ96IZ6 378 aaKnown RBP17.08■□□□□ 0.32
MSH5-207ENST00000425703 SENP1Q9P0U3 644 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 NPIPA1Q9UND3 350 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 ZGRF1Q86YA3 2104 aa17.08■□□□□ 0.32
MSH5-207ENST00000425703 GNG14A0A1W2PPG7 69 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 A0A1W2PS29 197 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 ZNF354AO60765 605 aaPredicted RBP17.07■□□□□ 0.32
MSH5-207ENST00000425703 SLC19A2O60779 497 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 NADKO95544 446 aaPredicted RBP17.07■□□□□ 0.32
MSH5-207ENST00000425703 TIA1P31483 386 aaKnown RBP eCLIP17.07■□□□□ 0.321e-6■■■■□ 19.4
MSH5-207ENST00000425703 CA7P43166 264 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 MAP4K2Q12851 820 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 HEPACAMQ14CZ8 416 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 ZNF791Q3KP31 576 aaPredicted RBP17.07■□□□□ 0.32
MSH5-207ENST00000425703 RGS9BPQ6ZS82 235 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 RNF165Q6ZSG1 346 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 ZNF615Q8N8J6 731 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 ZNF441Q8N8Z8 693 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 KLHL29Q96CT2 875 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 SPACA9Q96E40 222 aaPredicted RBP17.07■□□□□ 0.32
MSH5-207ENST00000425703 SMC6Q96SB8 1091 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 RRAGDQ9NQL2 400 aaPredicted RBP17.07■□□□□ 0.32
MSH5-207ENST00000425703 EHD3Q9NZN3 535 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 DLGAP4Q9Y2H0 992 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 ZNF835Q9Y2P0 537 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 WBP11Q9Y2W2 641 aaKnown RBP17.07■□□□□ 0.32
MSH5-207ENST00000425703 ZNF780BQ9Y6R6 833 aa17.07■□□□□ 0.32
MSH5-207ENST00000425703 C2orf92A0A1B0GVN3 265 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 NPIPB8E9PQR5 432 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 TFECO14948 347 aaPredicted RBP17.06■□□□□ 0.32
MSH5-207ENST00000425703 RSL1D1O76021 490 aaKnown RBP17.06■□□□□ 0.32
MSH5-207ENST00000425703 WISP2O76076 250 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 S1PR1P21453 382 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 CNR1P21554 472 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 NT5EP21589 574 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 SSTR4P31391 388 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 CASP6P55212 293 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 SRSF11Q05519 484 aaKnown RBP17.06■□□□□ 0.32
MSH5-207ENST00000425703 PRICKLE4Q2TBC4 344 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 ZNF750Q32MQ0 723 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 MTFR2Q6P444 385 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 LYPD8Q6UX82 237 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 Q6ZPB1 254 aaPredicted RBP17.06■□□□□ 0.32
MSH5-207ENST00000425703 GK5Q6ZS86 529 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 TAGAPQ8N103 731 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 MMP21Q8N119 569 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 LRRC25Q8N386 305 aaPredicted RBP17.06■□□□□ 0.32
MSH5-207ENST00000425703 VWA5B2Q8N398 1253 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 OR2M7Q8NG81 312 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 CTHRC1Q96CG8 243 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 MAGED4Q96JG8 741 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 ZNF681Q96N22 645 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 FAM111AQ96PZ2 611 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 GAL3ST4Q96RP7 486 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 FAM173AQ9BQD7 235 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 GATA5Q9BWX5 397 aaPredicted RBP17.06■□□□□ 0.32
MSH5-207ENST00000425703 OR10A5Q9H207 317 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 SH2D2AQ9NP31 389 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 SACM1LQ9NTJ5 587 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 DEPPQ9NTK1 212 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 HEY2Q9UBP5 337 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 UTS2RQ9UKP6 389 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 CFL2Q9Y281 166 aa17.06■□□□□ 0.32
MSH5-207ENST00000425703 ERAL1O75616 437 aaKnown RBP17.05■□□□□ 0.32
MSH5-207ENST00000425703 P04436 131 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 IL3P08700 152 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 ANXA4P09525 319 aaPredicted RBP17.05■□□□□ 0.32
MSH5-207ENST00000425703 FBXO45P0C2W1 286 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 CT62P0C5K7 136 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 PRPH2P23942 346 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 SERPINB3P29508 390 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 FEN1P39748 380 aaKnown RBP17.05■□□□□ 0.32
MSH5-207ENST00000425703 ALDH9A1P49189 494 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 GPR85P60893 370 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 MGAT2Q10469 447 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 IMPG1Q17R60 797 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 SPDYAQ5MJ70 313 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 C1QL3Q5VWW1 255 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 FJX1Q86VR8 437 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 SPPL2CQ8IUH8 684 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 DOK4Q8TEW6 326 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 PAQR8Q8TEZ7 354 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 C16orf78Q8WTQ4 265 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 SREK1Q8WXA9 508 aaKnown RBP17.05■□□□□ 0.32
MSH5-207ENST00000425703 ERP27Q96DN0 273 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 CNRIP1Q96F85 164 aaPredicted RBP17.05■□□□□ 0.32
MSH5-207ENST00000425703 TSPAN10Q9H1Z9 355 aaPredicted RBP17.05■□□□□ 0.32
MSH5-207ENST00000425703 TNFRSF12AQ9NP84 129 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 MAT2BQ9NZL9 334 aa17.05■□□□□ 0.32
MSH5-207ENST00000425703 PLEKHB1Q9UF11 243 aaPredicted RBP17.05■□□□□ 0.32
MSH5-207ENST00000425703 ZNF639Q9UID6 485 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms