RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 PSMA8Q8TAA3 256 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 KCNS3Q9BQ31 491 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 HDAC8Q9BY41 377 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 EGLN3Q9H6Z9 239 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 AHSPQ9NZD4 102 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 ZNF624Q9P2J8 865 aaPredicted RBP11.27□□□□□ -0.61
PTPRN-204ENST00000423636 TPRKBQ9Y3C4 175 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 SPAG17Q6Q759 2223 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 KIAA1549LQ6ZVL6 1849 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 ZDBF2Q9HCK1 2354 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 OR6C74A6NCV1 312 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 TRIM64A6NGJ6 449 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 ENTPD6O75354 484 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 CHRM4P08173 479 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 CHRNEQ04844 493 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 FCHO2Q0JRZ9 810 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 ZNF776Q68DI1 518 aaPredicted RBP11.27□□□□□ -0.61
PTPRN-204ENST00000423636 IGFN1Q86VF2 1251 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 NACC2Q96BF6 587 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 AMDHD1Q96NU7 426 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 PIP5K1AQ99755 562 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 CENPOQ9BU64 300 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 TTTY10Q9BZA0 68 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 DSN1Q9H410 356 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 ADAP2Q9NPF8 381 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 DNAAF2Q9NVR5 837 aaKnown RBP11.27□□□□□ -0.61
PTPRN-204ENST00000423636 TMEM45AQ9NWC5 275 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 FBXO34Q9NWN3 711 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 GDE1Q9NZC3 331 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 CLEC1BQ9P126 229 aa11.27□□□□□ -0.61
PTPRN-204ENST00000423636 TCRBV21S2A2A0A5A6 115 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 PRSS38A1L453 326 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 CACNB4O00305 520 aaPredicted RBP11.26□□□□□ -0.61
PTPRN-204ENST00000423636 P2RX6O15547 441 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 TLX2O43763 284 aaPredicted RBP11.26□□□□□ -0.61
PTPRN-204ENST00000423636 UQCRC2P22695 453 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 MAN2A2P49641 1150 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 RPS21P63220 83 aaKnown RBP11.26□□□□□ -0.61
PTPRN-204ENST00000423636 EEF1A2Q05639 463 aaKnown RBP11.26□□□□□ -0.61
PTPRN-204ENST00000423636 MYBPC3Q14896 1274 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 SLC9A5Q14940 896 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 COLEC12Q5KU26 742 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 ADAMTS16Q8TE57 1224 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 CREB3L4Q8TEY5 395 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 TP53INP1Q96A56 240 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 CLIP3Q96DZ5 547 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 SLC35G5Q96KT7 338 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 ART5Q96L15 291 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 TEX101Q9BY14 249 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 SLC35C2Q9NQQ7 365 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 PIAS3Q9Y6X2 628 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 CTSVO60911 334 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 GKN3PP0CG01 181 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 ARAFP10398 606 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 C5AR1P21730 350 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 GTF2E2P29084 291 aaKnown RBP11.26□□□□□ -0.61
PTPRN-204ENST00000423636 NTSR1P30989 418 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 GRK3P35626 688 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 PIK3CBP42338 1070 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 IFITM3Q01628 133 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 SLC13A2Q13183 592 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 PDE7AQ13946 482 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 TEAD4Q15561 434 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 TIGD6Q17RP2 521 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 FCRLBQ6BAA4 426 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 UNC5DQ6UXZ4 953 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 DNAJC5GQ8N7S2 189 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 SLC16A11Q8NCK7 471 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 SETD9Q8NE22 299 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 WDR36Q8NI36 951 aaKnown RBP11.26□□□□□ -0.61
PTPRN-204ENST00000423636 CXorf40BQ96DE9 158 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 MS4A6EQ96DS6 147 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 LGALS12Q96DT0 336 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 LINC00615Q96LM1 132 aaPredicted RBP11.26□□□□□ -0.61
PTPRN-204ENST00000423636 SRMSQ9H3Y6 488 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 EPHX3Q9H6B9 360 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 TIMMDC1Q9NPL8 285 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 ABCB10Q9NRK6 738 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 IRAK4Q9NWZ3 460 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 CYP8B1Q9UNU6 501 aa11.26□□□□□ -0.61
PTPRN-204ENST00000423636 LRRC72A6NJI9 287 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 ADAMDEC1O15204 470 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 ZW10O43264 779 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 KRT75O95678 551 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 NDUFV2P19404 249 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 CTHP32929 405 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 ST13P50502 369 aaKnown RBP11.25□□□□□ -0.61
PTPRN-204ENST00000423636 HNRNPFP52597 415 aaKnown RBP11.25□□□□□ -0.61
PTPRN-204ENST00000423636 GPR68Q15743 365 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 SDE2Q6IQ49 451 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 FAHD1Q6P587 224 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 FAM111BQ6SJ93 734 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 SLC34A3Q8N130 599 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 DNAJB8Q8NHS0 232 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 C19orf43Q9BQ61 176 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 EHD3Q9NZN3 535 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 KLF15Q9UIH9 416 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 PCDHGA2Q9Y5H1 932 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 EFCAB9A8MZ26 197 aa11.25□□□□□ -0.61
PTPRN-204ENST00000423636 M0R082 166 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms