RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 ABHD17BQ5VST6 288 aa16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 B3GNTL1Q67FW5 361 aaPredicted RBP16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 HSDL2Q6YN16 418 aa16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 RIMKLAQ8IXN7 391 aa16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 LIX1Q8N485 282 aa16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 ZADH2Q8N4Q0 377 aa16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 NATD1Q8N6N6 113 aa16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 OR7G1Q8NGA0 311 aa16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 OR5L2Q8NGL0 311 aa16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 SUN3Q8TAQ9 357 aa16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 NUBPLQ8TB37 319 aa16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 ACTRT2Q8TDY3 377 aa16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 EXOSC8Q96B26 276 aaKnown RBP16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 ZBTB20Q9HC78 741 aaPredicted RBP16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 MARCOQ9UEW3 520 aaPredicted RBP16.3■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 TMEM200CA6NKL6 621 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 GABRR3A8MPY1 467 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CLPSP04118 112 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 G6PDP11413 515 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 PRPS1L1P21108 318 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 NT5EP21589 574 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 SOX18P35713 384 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 FRKP42685 505 aaPredicted RBP16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CLDN8P56748 225 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 SLC37A1P57057 533 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 RNF4P78317 190 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 DUSP2Q05923 314 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 KLRB1Q12918 225 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 ZNF267Q14586 743 aaPredicted RBP16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 PRSS53Q2L4Q9 553 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 C6orf163Q5TEZ5 329 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 EPGNQ6UW88 154 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 Q6ZS92 163 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 MAVSQ7Z434 540 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 SPATA19Q7Z5L4 167 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CCDC116Q8IYX3 515 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 RBMXL3Q8N7X1 1067 aaKnown RBP16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 ZNF321PQ8N8H1 164 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CDC26Q8NHZ8 85 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 STON2Q8WXE9 905 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 PPP1R36Q96LQ0 422 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 C1orf50Q9BV19 199 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CDCP1Q9H5V8 836 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 TRIM45Q9H8W5 580 aaPredicted RBP16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 MAT2BQ9NZL9 334 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 ERVK-19Q9WJR5 959 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 USH1CQ9Y6N9 552 aa16.29■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 HRKO00198 91 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 SCAMP2O15127 329 aaKnown RBP16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 BCAS2O75934 225 aaPredicted RBP16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CT62P0C5K7 136 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 TRHRP34981 398 aaPredicted RBP16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 PTGR1Q14914 329 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 ZNF628Q5EBL2 1059 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 LINC00696Q6ZRV3 163 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CAMKMTQ7Z624 323 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 VWA5B2Q8N398 1253 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 ZNF615Q8N8J6 731 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 TEX19Q8NA77 164 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CEP70Q8NHQ1 597 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 PPCDCQ96CD2 204 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 COQ8BQ96D53 544 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 BBS4Q96RK4 519 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CNPPD1Q9BV87 410 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CCDC134Q9H6E4 229 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 WDR55Q9H6Y2 383 aaPredicted RBP16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 ACSS1Q9NUB1 689 aaPredicted RBP16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 ABI3Q9P2A4 366 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 MYOTQ9UBF9 498 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 ANAPC2Q9UJX6 822 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CFL2Q9Y281 166 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 YARS2Q9Y2Z4 477 aaKnown RBP16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 SPTA1P02549 2419 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 COL6A6A6NMZ7 2263 aa16.28■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 DYTNA2CJ06 578 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 PLOD2O00469 737 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 FCHO1O14526 889 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 PRKNO60260 465 aaPredicted RBP16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 PLOD3O60568 738 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 EDF1O60869 148 aaKnown RBP16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 WDPCPO95876 746 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 EPHA3P29320 983 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 NTSP30990 170 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 HPCAL1P37235 193 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 DIO3P55073 304 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 MLC1Q15049 377 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 MPEG1Q2M385 716 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 SLC9B1Q4ZJI4 515 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 FAM180BQ6P0A1 224 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 RNF111Q6ZNA4 994 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 C9orf40Q8IXQ3 194 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 CLHC1Q8NHS4 586 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 GFM2Q969S9 779 aaKnown RBP16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 PNPLA2Q96AD5 504 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 AMDHD1Q96NU7 426 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 PRPF18Q99633 342 aaKnown RBP16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 OR10A5Q9H207 317 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 GLIPR2Q9H4G4 154 aa16.27■□□□□ 0.2
COMMD3-BMI1-201ENST00000417470 A0A087WV62 115 aa16.26■□□□□ 0.19
COMMD3-BMI1-201ENST00000417470 ANKRD28O15084 1053 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms