RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 NLNQ9BYT8 704 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 FAM129AQ9BZQ8 928 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 CHRNA10Q9GZZ6 450 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 PCDHAC1Q9H158 963 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 C12orf65Q9H3J6 166 aaKnown RBP4.61□□□□□ -1.67
VPS41-205ENST00000414632 TMEM184CQ9NVA4 438 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 HCN3Q9P1Z3 774 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 CPSF2Q9P2I0 782 aaKnown RBP4.61□□□□□ -1.67
VPS41-205ENST00000414632 ANKMY1Q9P2S6 941 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 CTSFQ9UBX1 484 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 TBK1Q9UHD2 729 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 KCND3Q9UK17 655 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 TLK1Q9UKI8 766 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 ACOT9Q9Y305 439 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 KLK4Q9Y5K2 254 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 IKBKGQ9Y6K9 419 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 AP1M2Q9Y6Q5 423 aa4.61□□□□□ -1.67
VPS41-205ENST00000414632 CPAMD8Q8IZJ3 1885 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 A0A087X1B8 175 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 OR2W5A6NFC9 320 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 A6NL46 340 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 EIF4E1BA6NMX2 242 aaKnown RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 C21orf140B9A014 251 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 C4orf51C9J302 202 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 E9PLN8 166 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 K7EM74 188 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 SGK494L7N484 410 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 FOXS1O43638 330 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 ASNA1O43681 348 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 SRPX2O60687 465 aaPredicted RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 KERAO60938 352 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 DNAJB6O75190 326 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 VPS4BO75351 444 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 RDH16O75452 317 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 JRKO75564 520 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 KLF7O75840 302 aaPredicted RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 C1QL1O75973 258 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 KRT38O76015 456 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 KLHL2O95198 593 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 SIX3O95343 332 aaPredicted RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 SLU7O95391 586 aaKnown RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 UMODP07911 640 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 RAB40ALP0C0E4 278 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 GFAPP14136 432 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 FOLR3P41439 243 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 CCR10P46092 362 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 SERPINB9P50453 376 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 CSRP3P50461 194 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 ARSFP54793 590 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 RAC3P60763 192 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 RAB8AP61006 207 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 RPS15AP62244 130 aaKnown RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 CDKL1Q00532 357 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 REEP5Q00765 189 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 MC1RQ01726 317 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 EEF1A2Q05639 463 aaKnown RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 CDC16Q13042 620 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 NAA25Q14CX7 972 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 ERCC6LQ2NKX8 1250 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 PRTGQ2VWP7 1150 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 VWA2Q5GFL6 755 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 XKR6Q5GH73 641 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 TECRLQ5HYJ1 363 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 INTS11Q5TA45 600 aaKnown RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 MFSD4BQ5TF39 518 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 FAM111BQ6SJ93 734 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 ZNF517Q6ZMY9 492 aaPredicted RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 RPS27LQ71UM5 84 aaKnown RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 TRMT10CQ7L0Y3 403 aaKnown RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 TAOK1Q7L7X3 1001 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 PPP1R32Q7Z5V6 425 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 SYVN1Q86TM6 617 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 ISCA2Q86U28 154 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.6□□□□□ -1.67
VPS41-205ENST00000414632 RNF175Q8N4F7 328 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 MFSD9Q8NBP5 474 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 PDPRQ8NCN5 879 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 OR5T3Q8NGG3 340 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 PROKR1Q8TCW9 393 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 SNRNP27Q8WVK2 155 aaKnown RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 SLC13A3Q8WWT9 602 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 C8orf44Q96CB5 159 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 LRFN5Q96NI6 719 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 GPR78Q96P69 363 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 MOGAT1Q96PD6 335 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 ATOH8Q96SQ7 321 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 VKORC1Q9BQB6 163 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 HAUS8Q9BT25 410 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 GPR87Q9BY21 358 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 FUT8Q9BYC5 575 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 TXLNGYQ9BZA5 131 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 PCBD2Q9H0N5 130 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 TSPYL1Q9H0U9 437 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 KLHL31Q9H511 634 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 NMRAL1Q9HBL8 299 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 ZNF304Q9HCX3 659 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 ZNF71Q9NQZ8 489 aaPredicted RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 DNAJC11Q9NVH1 559 aa4.6□□□□□ -1.67
VPS41-205ENST00000414632 MRPS18AQ9NVS2 196 aaKnown RBP4.6□□□□□ -1.67
VPS41-205ENST00000414632 NUDT4Q9NZJ9 180 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms