RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CMTM7Q96FZ5 175 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 JSRP1Q96MG2 331 aaPredicted RBP11.12□□□□□ -0.63
LIMS2-210ENST00000413578 RILPQ96NA2 401 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 GPR22Q99680 433 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 PELOQ9BRX2 385 aaKnown RBP11.12□□□□□ -0.63
LIMS2-210ENST00000413578 UGT2B28Q9BY64 529 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 EPB41L4BQ9H329 900 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 BEX4Q9NWD9 120 aaPredicted RBP11.12□□□□□ -0.63
LIMS2-210ENST00000413578 CD274Q9NZQ7 290 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 FETUBQ9UGM5 382 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 SLC6A5Q9Y345 797 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 ASB4Q9Y574 426 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 ARHGAP21Q5T5U3 1957 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 A0A0A6YYD5 115 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 CXorf49A8MYA2 514 aaPredicted RBP11.11□□□□□ -0.63
LIMS2-210ENST00000413578 SNX4O95219 450 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 ACSL3O95573 720 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 GPR75O95800 540 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 HEXAP06865 529 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 OPRM1P35372 400 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 BSGP35613 385 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 SOX18P35713 384 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 PIK3CBP42338 1070 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 CASP3P42574 277 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 AGFG1P52594 562 aaKnown RBP11.11□□□□□ -0.63
LIMS2-210ENST00000413578 FBXW4P57775 412 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 PDIA2Q13087 525 aaKnown RBP11.11□□□□□ -0.63
LIMS2-210ENST00000413578 ZNF267Q14586 743 aaPredicted RBP11.11□□□□□ -0.63
LIMS2-210ENST00000413578 SF3B4Q15427 424 aaKnown RBP eCLIP11.11□□□□□ -0.63
LIMS2-210ENST00000413578 EIPR1Q53HC9 387 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 GRHL2Q6ISB3 625 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 TAGAPQ8N103 731 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 C9orf106Q8NAJ2 232 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 HUS1BQ8NHY5 278 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 RIT1Q92963 219 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 ADIPOR1Q96A54 375 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 RGMAQ96B86 450 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 TSPAN17Q96FV3 270 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 DACH2Q96NX9 599 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 GNRHR2Q96P88 292 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 TRIB1Q96RU8 372 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 KRT12Q99456 494 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 CALHM2Q9HA72 323 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 NEUROD4Q9HD90 331 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 SNX15Q9NRS6 342 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 PHF11Q9UIL8 331 aa11.11□□□□□ -0.63
LIMS2-210ENST00000413578 KIAA1549Q9HCM3 1950 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 MPDZO75970 2070 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 C2orf92A0A1B0GVN3 265 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 A0A1W2PR48 441 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 A0A1W2PS29 197 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 EEF1E1-BLOC1S5C9J1V9 151 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 TP53I11O14683 189 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 EEF1E1O43324 174 aaKnown RBP11.1□□□□□ -0.63
LIMS2-210ENST00000413578 TMPRSS11DO60235 418 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 EEDO75530 441 aaKnown RBP11.1□□□□□ -0.63
LIMS2-210ENST00000413578 TRAPPC6AO75865 159 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 SLC35E2BP0CK96 405 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 SLC35E2P0CK97 266 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 PCNAP12004 261 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 PTPN6P29350 595 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 SSTR4P31391 388 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 GMPRP36959 345 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 BUD31P41223 144 aaPredicted RBP11.1□□□□□ -0.63
LIMS2-210ENST00000413578 SLCO1A2P46721 670 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 NAGLUP54802 743 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 SLC12A2P55011 1212 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 FUT7Q11130 342 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 FOXF2Q12947 444 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 DLG1Q12959 904 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 PCBP2Q15366 365 aaKnown RBP eCLIP11.1□□□□□ -0.634e-6■■■■□ 25.7
LIMS2-210ENST00000413578 SHEQ5VZ18 495 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 TIGD3Q6B0B8 471 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 TMEM81Q6P7N7 255 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 CLEC9AQ6UXN8 241 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 ISCA2Q86U28 154 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 PRIMA1Q86XR5 153 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 ZNF615Q8N8J6 731 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 C17orf47Q8NEP4 570 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 ZPLD1Q8TCW7 415 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 SMPDL3BQ92485 455 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 UCN3Q969E3 161 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 TMEM41AQ96HV5 264 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 COX4I2Q96KJ9 171 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 UCN2Q96RP3 112 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 ATOH8Q96SQ7 321 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 RBBP8Q99708 897 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 DDX31Q9H8H2 851 aaKnown RBP11.1□□□□□ -0.63
LIMS2-210ENST00000413578 CXorf21Q9HAI6 301 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 LYARQ9NX58 379 aaKnown RBP11.1□□□□□ -0.63
LIMS2-210ENST00000413578 TEX10Q9NXF1 929 aaPredicted RBP11.1□□□□□ -0.63
LIMS2-210ENST00000413578 NUDT4Q9NZJ9 180 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 ADGRE2Q9UHX3 823 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 CAMK2AQ9UQM7 478 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 NPFFR2Q9Y5X5 522 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 TLN2Q9Y4G6 2542 aa11.1□□□□□ -0.63
LIMS2-210ENST00000413578 CSPG4Q6UVK1 2322 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 GLOD5A6NK44 160 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 CAPN14A8MX76 684 aa11.09□□□□□ -0.63
LIMS2-210ENST00000413578 K7EPI3 171 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms