RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 PRICKLE4Q2TBC4 344 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 SLC9B1Q4ZJI4 515 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 ACER2Q5QJU3 275 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 C6orf163Q5TEZ5 329 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 ABHD17BQ5VST6 288 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 RGS9BPQ6ZS82 235 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 LARP4Q71RC2 724 aaKnown RBP eCLIP12.97□□□□□ -0.33
CPNE1-206ENST00000412056 CCDC116Q8IYX3 515 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 BEST3Q8N1M1 668 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 SLC5A8Q8N695 610 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 ADCY4Q8NFM4 1077 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 SUN3Q8TAQ9 357 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 NUDT8Q8WV74 236 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 ZNF354BQ96LW1 612 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 LMF1Q96S06 567 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 MFRPQ9BY79 579 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 BRINP2Q9C0B6 783 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 LIN28AQ9H9Z2 209 aaKnown RBP12.97□□□□□ -0.33
CPNE1-206ENST00000412056 SLAMF7Q9NQ25 335 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 ASIC5Q9NY37 505 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 TAS2R7Q9NYW3 318 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 PLA2G3Q9NZ20 509 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 COPS7AQ9UBW8 275 aa12.97□□□□□ -0.33
CPNE1-206ENST00000412056 EIF3LQ9Y262 564 aaKnown RBP12.97□□□□□ -0.33
CPNE1-206ENST00000412056 TMEM200CA6NKL6 621 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 MYO1GB0I1T2 1018 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 SCAMP2O15127 329 aaKnown RBP12.96□□□□□ -0.33
CPNE1-206ENST00000412056 TBX19O60806 448 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 ALDOCP09972 364 aaKnown RBP12.96□□□□□ -0.33
CPNE1-206ENST00000412056 NTSP30990 170 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 DIO3P55073 304 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 MLF1P58340 268 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 RNF4P78317 190 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 MRPS35P82673 323 aaKnown RBP12.96□□□□□ -0.33
CPNE1-206ENST00000412056 MGAT2Q10469 447 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 FUT7Q11130 342 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 EXOSC7Q15024 291 aaKnown RBP12.96□□□□□ -0.33
CPNE1-206ENST00000412056 MEP1AQ16819 746 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 MPEG1Q2M385 716 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 NADK2Q4G0N4 442 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 OGFOD2Q6N063 350 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 IGFL3Q6UXB1 125 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 HSDL2Q6YN16 418 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 RNF111Q6ZNA4 994 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 C16orf47Q6ZP98 133 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-206ENST00000412056 RPS19BP1Q86WX3 136 aaKnown RBP12.96□□□□□ -0.33
CPNE1-206ENST00000412056 C9orf40Q8IXQ3 194 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 LRRC34Q8IZ02 419 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 SAMD14Q8IZD0 417 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-206ENST00000412056 FAM9CQ8IZT9 166 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 VWA5B2Q8N398 1253 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 ZADH2Q8N4Q0 377 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 KRTCAP2Q8N6L1 136 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 OR7A2PQ8NGA2 310 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 OR9A2Q8NGT5 310 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 TM9SF4Q92544 642 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 CIDECQ96AQ7 238 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-206ENST00000412056 PPCDCQ96CD2 204 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 ZNF764Q96H86 408 aaPredicted RBP12.96□□□□□ -0.33
CPNE1-206ENST00000412056 MAELQ96JY0 434 aaKnown RBP12.96□□□□□ -0.33
CPNE1-206ENST00000412056 BBS4Q96RK4 519 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 STMN3Q9NZ72 180 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 SH3BP4Q9P0V3 963 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 ATP6V1HQ9UI12 483 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 TEKT2Q9UIF3 430 aa12.96□□□□□ -0.33
CPNE1-206ENST00000412056 PIEZO2Q9H5I5 2752 aa12.96□□□□□ -0.34
CPNE1-206ENST00000412056 GABRR3A8MPY1 467 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 TCP11X1B4DZS4 312 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 PDPK1O15530 556 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 DIAPH2O60879 1101 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 ZFAND5O76080 213 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 WDPCPO95876 746 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 PCSK2P16519 638 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 S1PR1P21453 382 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 HPCAL1P37235 193 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 NCBP2P52298 156 aaKnown RBP eCLIP12.95□□□□□ -0.349e-8■□□□□ 9.8
CPNE1-206ENST00000412056 SLC37A1P57057 533 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 MAP4K2Q12851 820 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 TRMT12Q53H54 448 aaKnown RBP12.95□□□□□ -0.34
CPNE1-206ENST00000412056 ZNF628Q5EBL2 1059 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 SLC6A19Q695T7 634 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 NXNQ6DKJ4 435 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 HPS6Q86YV9 775 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 LGI4Q8N135 537 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 ARMC10Q8N2F6 343 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 SIMC1Q8NDZ2 872 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 OR8K3Q8NH51 312 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 ZNF675Q8TD23 568 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 KAT2AQ92830 837 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 CTHRC1Q96CG8 243 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 MTERF3Q96E29 417 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 GLIPR2Q9H4G4 154 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 ANKRA2Q9H9E1 313 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 LUZP4Q9P127 313 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 ZNF639Q9UID6 485 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 IGSF10Q6WRI0 2623 aa12.95□□□□□ -0.34
CPNE1-206ENST00000412056 DYTNA2CJ06 578 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 EIF4E1BA6NMX2 242 aaKnown RBP12.94□□□□□ -0.34
CPNE1-206ENST00000412056 WWP2O00308 870 aa12.94□□□□□ -0.34
CPNE1-206ENST00000412056 EDF1O60869 148 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms