RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 LRRC25Q8N386 305 aaPredicted RBP5.19□□□□□ -1.58
EPHA4-202ENST00000409854 METTL25Q8N6Q8 603 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 HORMAD2Q8N7B1 307 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 TMEM52Q8NDY8 209 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 OR4K14Q8NGD5 310 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 OR56A1Q8NGH5 318 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 FBXO30Q8TB52 745 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 TANKQ92844 425 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 MAL2Q969L2 176 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 ELP4Q96EB1 424 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 GIMAP5Q96F15 307 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 CENPNQ96H22 339 aaPredicted RBP5.19□□□□□ -1.58
EPHA4-202ENST00000409854 PYURFQ96I23 114 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 CHID1Q9BWS9 393 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 SOHLH2Q9NX45 425 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF451Q9Y4E5 1061 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 DTNAQ9Y4J8 743 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 MAP4K5Q9Y4K4 846 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 SNX8Q9Y5X2 465 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF780BQ9Y6R6 833 aa5.19□□□□□ -1.58
EPHA4-202ENST00000409854 GOLGA4Q13439 2230 aaKnown RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 LAMA1P25391 3075 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 HYKKA2RU49 373 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF860A6NHJ4 632 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 H0YIG0 161 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 SGK494L7N484 410 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 UPK1AO00322 258 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 EMC8O43402 210 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 RDH16O75452 317 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 FHP07954 510 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 SYPP08247 313 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 TFPTP0C1Z6 253 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CKMT1AP12532 417 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CPMP14384 443 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 NELFEP18615 380 aaKnown RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 FEN1P39748 380 aaKnown RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 SIM1P81133 766 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 SHC2P98077 582 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CDK6Q00534 326 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 GRM7Q14831 915 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF628Q5EBL2 1059 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 FHL5Q5TD97 284 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 TMEM71Q6P5X7 295 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CEACAM20Q6UY09 585 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CCDC116Q8IYX3 515 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 SHISA5Q8N114 240 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PACRGLQ8N7B6 248 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 OR9A4Q8NGU2 314 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF675Q8TD23 568 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 NAT6Q93015 286 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ANKRD9Q96BM1 317 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 VMP1Q96GC9 406 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 SLC35G5Q96KT7 338 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF570Q96NI8 536 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 SEPHS2Q99611 448 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 DPYSL5Q9BPU6 564 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 NTN4Q9HB63 628 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 C8orf4Q9NR00 106 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ZCCHC3Q9NUD5 404 aaKnown RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 UBAP1Q9NZ09 502 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PCDHGA5Q9Y5G8 931 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 A0A1W2PQM1 296 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ACOX3O15254 700 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 CHST10O43529 356 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ASNA1O43681 348 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 FGF17O60258 216 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 DPM1O60762 260 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 GPR75O95800 540 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 C8orf89P0DMQ9 161 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 GPC1P35052 558 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 MAN2A2P49641 1150 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 KHKP50053 298 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 AQP4P55087 323 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 FOLH1Q04609 750 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 TUBA3CQ13748 450 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 GPR19Q15760 415 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 IQCCQ4KMZ1 466 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PLA2G2CQ5R387 149 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 YOD1Q5VVQ6 348 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PPP4R4Q6NUP7 873 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 BHLHB9Q6PI77 547 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 TMEM107Q6UX40 140 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ANGPTL8Q6UXH0 198 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF574Q6ZN55 896 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 DBX2Q6ZNG2 339 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 PIWIL3Q7Z3Z3 882 aaKnown RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 TMPRSS9Q7Z410 1059 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 AMIGO2Q86SJ2 522 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 LGI4Q8N135 537 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 OR2L13Q8N349 312 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 Q8N9G6 341 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 OR9A2Q8NGT5 310 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 NFKBIDQ8NI38 313 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 MVB12AQ96EY5 273 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 BTBD9Q96Q07 612 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 NUDT22Q9BRQ3 303 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 SPRTNQ9H040 489 aaPredicted RBP5.18□□□□□ -1.58
EPHA4-202ENST00000409854 SEMA6AQ9H2E6 1030 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 DCAF16Q9NXF7 216 aa5.18□□□□□ -1.58
EPHA4-202ENST00000409854 ANGPT4Q9Y264 503 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms