RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 MLF1P58340 268 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 RNF4P78317 190 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 PMP22Q01453 160 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 SRSF11Q05519 484 aaKnown RBP9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 TUBA3CQ13748 450 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 HEPACAMQ14CZ8 416 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 EXOSC7Q15024 291 aaKnown RBP9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 KIAA0040Q15053 153 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 TLR1Q15399 786 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 OR1C1Q15619 314 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 NNATQ16517 81 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 PRSS53Q2L4Q9 553 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 RFTN2Q52LD8 501 aaPredicted RBP9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 FAM71E1Q6IPT2 247 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 TUBA3EQ6PEY2 450 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 FAM111BQ6SJ93 734 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 HSDL2Q6YN16 418 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 TICAM1Q8IUC6 712 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 LGI4Q8N135 537 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 LRRC25Q8N386 305 aaPredicted RBP9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 LIX1Q8N485 282 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 FNDC5Q8NAU1 212 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 OR9A2Q8NGT5 310 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 CPT1CQ8TCG5 803 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 FCRL1Q96LA6 429 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 PPP3R2Q96LZ3 170 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 LMF1Q96S06 567 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 CCT7Q99832 543 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 UTP23Q9BRU9 249 aaKnown RBP9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 NUF2Q9BZD4 464 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 RNF32Q9H0A6 362 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 ACBD3Q9H3P7 528 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 ANKRA2Q9H9E1 313 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 CXorf21Q9HAI6 301 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 SIRT5Q9NXA8 310 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 STMN3Q9NZ72 180 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 MAT2BQ9NZL9 334 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 BAIAP2L1Q9UHR4 511 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 PCDHGA10Q9Y5H3 936 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 SVILO95425 2214 aa9.55□□□□□ -0.88
TSPAN9-202ENST00000407263 NPIPB8E9PQR5 432 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 ZFAND5O76080 213 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 IGKV3-11P04433 115 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 DRD2P14416 443 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 PCSK2P16519 638 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 CSNK2A2P19784 350 aaPredicted RBP9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 DDCP20711 480 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 NTSP30990 170 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 SOX3P41225 446 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 GSTM5P46439 218 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 RPL14P50914 215 aaKnown RBP9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 SLC18A1P54219 525 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 PPP2R2AP63151 447 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 PTGR1Q14914 329 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 PRICKLE4Q2TBC4 344 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 ZNF385BQ569K4 471 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 ZNF766Q5HY98 468 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 IKBIPQ70UQ0 350 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 SLC29A4Q7RTT9 530 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 ZGRF1Q86YA3 2104 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 FAM9CQ8IZT9 166 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 CYP4Z2PQ8N1L4 340 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 VWA5B2Q8N398 1253 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 CISD2Q8N5K1 135 aaKnown RBP9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 TMEM156Q8N614 296 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 MDS2Q8NDY4 140 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 SIMC1Q8NDZ2 872 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 FAM76AQ8TAV0 307 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 DYDC1Q8WWB3 177 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 ASB15Q8WXK1 588 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 KAT2AQ92830 837 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 ITFG2Q969R8 447 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 SENP5Q96HI0 755 aaPredicted RBP9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 C5orf34Q96MH7 638 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 ZNF681Q96N22 645 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 BBS4Q96RK4 519 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 MANSC1Q9H8J5 431 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 SLC35C2Q9NQQ7 365 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 LRFN1Q9P244 771 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 BCAP29Q9UHQ4 241 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 EXO1Q9UQ84 846 aaKnown RBP9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 DTX4Q9Y2E6 619 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 NTNG1Q9Y2I2 539 aa9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 NUP214P35658 2090 aaPredicted RBP9.54□□□□□ -0.88
TSPAN9-202ENST00000407263 TRAV17A0A0B4J275 112 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 GOLGA8QA0A0J9YX86 632 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 GOLGA8OA6NCC3 632 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 TMEM200CA6NKL6 621 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 GOLGA8NF8WBI6 632 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 PDPK1O15530 556 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 ZNF354AO60765 605 aaPredicted RBP9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 PRAMEF2O60811 474 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 SNNO75324 88 aaPredicted RBP9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 NME6O75414 186 aaPredicted RBP9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 SLC25A12O75746 678 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 OR6B1O95007 311 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 ATP1B1P05026 303 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 BCKDHAP12694 445 aa9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 EFNA1P20827 205 aaPredicted RBP9.53□□□□□ -0.88
TSPAN9-202ENST00000407263 MAPK1P28482 360 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms