RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 SMPDL3AQ92484 453 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 TM9SF4Q92544 642 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 OTUB1Q96FW1 271 aaPredicted RBP9.31□□□□□ -0.92
MSH2-202ENST00000406134 NEDD4LQ96PU5 975 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 ROGDIQ9GZN7 287 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 C14orf119Q9NWQ9 140 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 SCN2AQ99250 2005 aa9.31□□□□□ -0.92
MSH2-202ENST00000406134 FANCMQ8IYD8 2048 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 SAGE2PA6NJ88 616 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 PDPK1O15530 556 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 GSTT2P0CG29 244 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 GSTT2BP0CG30 244 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 TNFSF8P32971 234 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 CSTF2P33240 577 aaKnown RBP eCLIP9.3□□□□□ -0.92
MSH2-202ENST00000406134 SOX18P35713 384 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 NKX2-5P52952 324 aaPredicted RBP9.3□□□□□ -0.92
MSH2-202ENST00000406134 CDK5Q00535 292 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 ZNF234Q14588 700 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 GPR19Q15760 415 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 SYT14P1Q58G82 188 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 KIAA1161Q6NSJ0 714 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 ADAMTSL4Q6UY14 1074 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 MRGPREQ86SM8 312 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 LAX1Q8IWV1 398 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 AMER2Q8N7J2 671 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 POC5Q8NA72 575 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 OR8D4Q8NGM9 314 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 GPR151Q8TDV0 419 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 GDF15Q99988 308 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 DDX31Q9H8H2 851 aaKnown RBP9.3□□□□□ -0.92
MSH2-202ENST00000406134 IMPAD1Q9NX62 359 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 EML5Q05BV3 1969 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 CARNS1A5YM72 827 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 H7BY64 318 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 VEGFDO43915 354 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 THY1P04216 161 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 MAPK12P53778 367 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 CSNK1G2P78368 415 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 FGL2Q14314 439 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 OCLNQ16625 522 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 ZNF750Q32MQ0 723 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 GLYR1Q49A26 553 aaPredicted RBP9.3□□□□□ -0.92
MSH2-202ENST00000406134 HEATR4Q86WZ0 1026 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 MEX3DQ86XN8 651 aaKnown RBP9.3□□□□□ -0.92
MSH2-202ENST00000406134 DCUN1D3Q8IWE4 304 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 PHC2Q8IXK0 858 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 FAM20CQ8IXL6 584 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 OR52I1Q8NGK6 324 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 AMDHD1Q96NU7 426 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 PRAP1Q96NZ9 151 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 DCLRE1CQ96SD1 692 aaKnown RBP9.3□□□□□ -0.92
MSH2-202ENST00000406134 NLNQ9BYT8 704 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 MIEF1Q9NQG6 463 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 TAS2R7Q9NYW3 318 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 PLEKHB1Q9UF11 243 aaPredicted RBP9.3□□□□□ -0.92
MSH2-202ENST00000406134 ASF1AQ9Y294 204 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 YARS2Q9Y2Z4 477 aaKnown RBP9.3□□□□□ -0.92
MSH2-202ENST00000406134 A0A1W2PRQ8 180 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 HYKKA2RU49 373 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 CACNB4O00305 520 aaPredicted RBP9.3□□□□□ -0.92
MSH2-202ENST00000406134 FAAHO00519 579 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 PLD2O14939 933 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 PEBP1P30086 187 aaKnown RBP9.3□□□□□ -0.92
MSH2-202ENST00000406134 HTRA3P83110 453 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 GPR50Q13585 617 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 CCBE1Q6UXH8 406 aaPredicted RBP9.3□□□□□ -0.92
MSH2-202ENST00000406134 OR6T1Q8NGN1 323 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 WDFY2Q96P53 400 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 CTRCQ99895 268 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 KCNK12Q9HB15 430 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 SMURF1Q9HCE7 757 aa9.3□□□□□ -0.92
MSH2-202ENST00000406134 GPR55Q9Y2T6 319 aaPredicted RBP9.3□□□□□ -0.92
MSH2-202ENST00000406134 A0A0B4J293 547 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ZNF670-ZNF695F2Z2N8 137 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 NARSO43776 548 aaKnown RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 PRICKLE3O43900 615 aaPredicted RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 MPZL2O60487 215 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 OXSR1O95747 527 aaPredicted RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 PRNPP04156 253 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 XPAP23025 273 aaPredicted RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 PSPHP78330 225 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 OLR1P78380 273 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 CDK3Q00526 305 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ALDH6A1Q02252 535 aaKnown RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 SF3B4Q15427 424 aaKnown RBP eCLIP9.29□□□□□ -0.92
MSH2-202ENST00000406134 ZIC1Q15915 447 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 UAP1L1Q3KQV9 507 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 VASNQ6EMK4 673 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 HIST2H2AA3Q6FI13 130 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 SHISA5Q8N114 240 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 POF1BQ8WVV4 589 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 TFGQ92734 400 aaPredicted RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 EXOSC8Q96B26 276 aaKnown RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 RNF31Q96EP0 1072 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 MACROD1Q9BQ69 325 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 PRR14Q9BWN1 585 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 SRRQ9GZT4 340 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 QRSL1Q9H0R6 528 aaKnown RBP9.29□□□□□ -0.92
MSH2-202ENST00000406134 OR51I1Q9H343 314 aa9.29□□□□□ -0.92
MSH2-202ENST00000406134 ZNF556Q9HAH1 456 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms