RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 LINC01599Q8WXQ3 324 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 HERVK_113Q902F9 699 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 TSSK6Q9BXA6 273 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 ASH2LQ9UBL3 628 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 LHX3Q9UBR4 397 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 TAC3Q9UHF0 121 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 CLEC2DQ9UHP7 191 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 TMEM202A6NGA9 273 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 AKR7A2O43488 359 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 ADORA3P0DMS8 318 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 GLULP15104 373 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 CBLP22681 906 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 CFL1P23528 166 aaKnown RBP11.38□□□□□ -0.59
HMGB1-206ENST00000405805 AOAHP28039 575 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 SLC19A1P41440 591 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 MAP4K2Q12851 820 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 CBLBQ13191 982 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 SNTA1Q13424 505 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 SLC5A12Q1EHB4 618 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 CD300LGQ6UXG3 332 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 NANPQ8TBE9 248 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 NEIL2Q969S2 332 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 SCRN2Q96FV2 425 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 SEC22CQ9BRL7 303 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 LINC00597Q9H2U6 94 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 SMURF1Q9HCE7 757 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 CD93Q9NPY3 652 aa11.38□□□□□ -0.59
HMGB1-206ENST00000405805 WDR81Q562E7 1941 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 FAM25EA8MYX2 175 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 LEFTY1O75610 366 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 CEBPGP53567 150 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 FGL1Q08830 312 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 GINS1Q14691 196 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 LASP1Q14847 261 aaKnown RBP11.37□□□□□ -0.59
HMGB1-206ENST00000405805 CDONQ4KMG0 1287 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 TOR2AQ5JU69 321 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 C22orf39Q6P5X5 142 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 GDPD4Q6W3E5 623 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 IQCHQ86VS3 1027 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 TP53I13Q8NBR0 393 aaPredicted RBP11.37□□□□□ -0.59
HMGB1-206ENST00000405805 WDR48Q8TAF3 677 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 ST8SIA4Q92187 359 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 F2RL3Q96RI0 385 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 ZNF607Q96SK3 696 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 ZNF768Q9H5H4 540 aaKnown RBP11.37□□□□□ -0.59
HMGB1-206ENST00000405805 WNT6Q9Y6F9 365 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 TEX51A0A1B0GUA7 166 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 IQCMA0A1B0GVH7 501 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 FEZF1A0PJY2 475 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 H7BY64 318 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 ANKRD28O15084 1053 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 FKTNO75072 461 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 H1F0P07305 194 aaKnown RBP11.37□□□□□ -0.59
HMGB1-206ENST00000405805 ZNF14P17017 642 aaPredicted RBP11.37□□□□□ -0.59
HMGB1-206ENST00000405805 CRISP1P54107 249 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 HOXC5Q00444 222 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 LRRN1Q6UXK5 716 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 COMMD6Q7Z4G1 85 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 SLC51BQ86UW2 128 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 TMEM25Q86YD3 366 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 LAX1Q8IWV1 398 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 MMP21Q8N119 569 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 DYNC2LI1Q8TCX1 351 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 RAD51AP1Q96B01 352 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 TXNDC15Q96J42 360 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 PRAP1Q96NZ9 151 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 NTMT1Q9BV86 223 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 PRR14Q9BWN1 585 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 NMNAT1Q9HAN9 279 aaPredicted RBP11.37□□□□□ -0.59
HMGB1-206ENST00000405805 ASAH2Q9NR71 780 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 HRH3Q9Y5N1 445 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 A0A1W2PQ09 198 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 A0A1W2PQL4 384 aaPredicted RBP11.37□□□□□ -0.59
HMGB1-206ENST00000405805 M0R3H8 397 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 SLC16A6O15403 523 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 LATO43561 262 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 CXCL14O95715 111 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 AP1S2P56377 157 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 OLFML2AQ68BL7 652 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 MARCH9Q86YJ5 346 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 LURAP1Q96LR2 239 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 ANKRA2Q9H9E1 313 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 GTF2A1LQ9UNN4 478 aa11.37□□□□□ -0.59
HMGB1-206ENST00000405805 CIB4A0PJX0 185 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 APOC1P02654 83 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 PRR35P0CG20 571 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 CD72P21854 359 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 ZNF763Q0D2J5 394 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 TMEM115Q12893 351 aaPredicted RBP11.36□□□□□ -0.59
HMGB1-206ENST00000405805 GAB1Q13480 694 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 HES5Q5TA89 166 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 CBLL1Q75N03 491 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 DNAJB8Q8NHS0 232 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 LRR1Q96L50 414 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 COQ10AQ96MF6 247 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 UBE2QL1A1L167 161 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 TBC1D3BA6NDS4 549 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 CDK1P06493 297 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 OR12D1P0DN82 309 aa11.36□□□□□ -0.59
HMGB1-206ENST00000405805 CPN2P22792 545 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms