RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 GALNT1Q10472 559 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ASPHQ12797 758 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF267Q14586 743 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 C3AR1Q16581 482 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 GGTA1PQ4G0N0 100 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 CCNYL2Q5T2Q4 361 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 FAM180BQ6P0A1 224 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 TMEM64Q6YI46 380 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 SH2D5Q6ZV89 423 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 GPRIN3Q6ZVF9 776 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 NCCRP1Q6ZVX7 275 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 SIAH3Q8IW03 269 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 SULF2Q8IWU5 870 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 C9orf40Q8IXQ3 194 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ST13P4Q8IZP2 240 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 C4orf33Q8N1A6 199 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 METTL4Q8N3J2 472 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 C1orf52Q8N6N3 182 aaKnown RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 CCNYL1Q8N7R7 359 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 FAM98AQ8NCA5 519 aaKnown RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 PSD4Q8NDX1 1056 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ACMSDQ8TDX5 336 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ASB15Q8WXK1 588 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 TANKQ92844 425 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 TMEM125Q96AQ2 219 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 RBM18Q96H35 190 aaKnown RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 GPR137Q96N19 417 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 GAL3ST4Q96RP7 486 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF382Q96SR6 550 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 CNPPD1Q9BV87 410 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 C1QTNF3Q9BXJ4 246 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 TRIM45Q9H8W5 580 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 HPF1Q9NWY4 346 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 MS4A12Q9NXJ0 267 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 PSD3Q9NYI0 1048 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 MYOTQ9UBF9 498 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 COPS7AQ9UBW8 275 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 FETUBQ9UGM5 382 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 TRPS1Q9UHF7 1281 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 TINAGQ9UJW2 476 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 PPT2Q9UMR5 302 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 SNX6Q9UNH7 406 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ERVK-11Q9UQG0 969 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 ERVK-19Q9WJR5 959 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 KLF13Q9Y2Y9 288 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 YARS2Q9Y2Z4 477 aaKnown RBP5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 TIMM22Q9Y584 194 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 PCDHGB6Q9Y5F9 930 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 NINQ8N4C6 2090 aa5.34□□□□□ -1.55
HMGB1P20-201ENST00000402555 A0A1B0GUH1 482 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 TLDC2A0PJX2 215 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 FAM166BA8MTA8 275 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 CCL21O00585 134 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 UBFD1O14562 309 aaKnown RBP5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 TFECO14948 347 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 ASNA1O43681 348 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 HS6ST1O60243 411 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 CDC40O60508 579 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 PLIN3O60664 434 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 SLC19A2O60779 497 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 GLRA3O75311 464 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 PDE9AO76083 593 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 LRATO95237 230 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 NADKO95544 446 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 CLPSP04118 112 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 GSTA1P08263 222 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 CT62P0C5K7 136 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 SLC35E2P0CK97 266 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 CCL3P10147 92 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 MYL2P10916 166 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 TNFRSF8P28908 595 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 SERPINB3P29508 390 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 HMOX2P30519 316 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 FEN1P39748 380 aaKnown RBP5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 DNASE1L1P49184 302 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 ALDH9A1P49189 494 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 XKP51811 444 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 ARFIP1P53367 373 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 MAPK12P53778 367 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 FOXA1P55317 472 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 SLC37A1P57057 533 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 HMGCS1Q01581 520 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 DUSP2Q05923 314 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 BTKQ06187 659 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 TBL3Q12788 808 aaKnown RBP5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 LCP2Q13094 533 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 RASA2Q15283 850 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 NDUFAF5Q5TEU4 345 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 OR52E8Q6IFG1 317 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 FAM111BQ6SJ93 734 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 ZYG11AQ6WRX3 759 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 C3P1Q6ZMU1 363 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 RNF111Q6ZNA4 994 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 PAGE2Q7Z2X7 111 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 MAMDC2Q7Z304 686 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 FGD2Q7Z6J4 655 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 TDRPQ86YL5 185 aa5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 CHERPQ8IWX8 916 aaKnown RBP5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 EIF1ADQ8N9N8 165 aaKnown RBP5.33□□□□□ -1.56
HMGB1P20-201ENST00000402555 CCDC63Q8NA47 563 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms