RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 KLHL12Q53G59 568 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 SLC35F1Q5T1Q4 408 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 BCL2L15Q5TBC7 163 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 SLX4IPQ5VYV7 408 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 SLC30A6Q6NXT4 461 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 TTC23LQ6PF05 361 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 OR4D11Q8NGI4 311 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.7□□□□□ -1.022e-7■■■□□ 19.1
HPS4-203ENST00000402105 PIGKQ92643 395 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 UFD1Q92890 307 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 PPIL3Q9H2H8 161 aaKnown RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 CWH43Q9H720 699 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 SPG21Q9NZD8 308 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 CNOT2Q9NZN8 540 aaKnown RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 H2AFY2Q9P0M6 372 aaPredicted RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 HCN2Q9UL51 889 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 ABT1Q9ULW3 272 aaKnown RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 UNC80Q8N2C7 3258 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 C5orf42Q9H799 3197 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 ANKRD36A6QL64 1941 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 A0A075B6Q4 140 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 HYKKA2RU49 373 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 INMT-MINDY4F8WBC2 141 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 DVL2O14641 736 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 PPM1DO15297 605 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 SCO2O43819 266 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 HYAL3O43820 417 aaPredicted RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 ZNF821O75541 412 aaPredicted RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 RAB36O95755 333 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 PTX3P26022 381 aaPredicted RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 EVI2BP34910 448 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 SLC9A3P48764 834 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 FABP5Q01469 135 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 FAM205BPQ63HN1 556 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 RAET1GQ6H3X3 334 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 XKRXQ6PP77 449 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 IFNL1Q8IU54 200 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 NANOGP1Q8N7R0 232 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 NEIL3Q8TAT5 605 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 COL26A1Q96A83 441 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 KATNB1Q9BVA0 655 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 BHLHE41Q9C0J9 482 aaPredicted RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 TMEM245Q9H330 911 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 RC3H2Q9HBD1 1191 aaKnown RBP8.7□□□□□ -1.02
HPS4-203ENST00000402105 ASAH2Q9NR71 780 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 FKBP14Q9NWM8 211 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 TAC3Q9UHF0 121 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 PTPRDP23468 1912 aa8.7□□□□□ -1.02
HPS4-203ENST00000402105 A0A0X1KG70 313 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 PRR23AA6NEV1 266 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 H7BY64 318 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 POLR1CO15160 346 aaPredicted RBP8.69□□□□□ -1.02
HPS4-203ENST00000402105 LYRM1O43325 122 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 ARHGEF15O94989 841 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 IGHA2P01877 340 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 MSL3P1P0C860 447 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 CPN2P22792 545 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 POLR2LP62875 67 aaKnown RBP8.69□□□□□ -1.02
HPS4-203ENST00000402105 ZNF750Q32MQ0 723 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 WDR45BQ5MNZ6 344 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 CST9Q5W186 159 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 SLCO4C1Q6ZQN7 724 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 KLBQ86Z14 1044 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 SETD6Q8TBK2 473 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 SMAP2Q8WU79 429 aaPredicted RBP8.69□□□□□ -1.02
HPS4-203ENST00000402105 SLC25A46Q96AG3 418 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 ZBED6CLQ96FA7 236 aaPredicted RBP8.69□□□□□ -1.02
HPS4-203ENST00000402105 MAP6Q96JE9 813 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 PRAP1Q96NZ9 151 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 DCLRE1CQ96SD1 692 aaKnown RBP8.69□□□□□ -1.02
HPS4-203ENST00000402105 CHST8Q9H2A9 424 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 SLA2Q9H6Q3 261 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 ZCCHC3Q9NUD5 404 aaKnown RBP8.69□□□□□ -1.02
HPS4-203ENST00000402105 EXTL2Q9UBQ6 330 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 ZFR2Q9UPR6 939 aaKnown RBP8.69□□□□□ -1.02
HPS4-203ENST00000402105 CCL26Q9Y258 94 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 LOC105369274A0A096LPK9 316 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 H0YIV9 168 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 I3L521 148 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 MPC1LP0DKB6 136 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 NPPBP16860 134 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 OR3A3P47888 321 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 P2RX3P56373 397 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 TAS2R41P59536 307 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 RHAGQ02094 409 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 LASP1Q14847 261 aaKnown RBP8.69□□□□□ -1.02
HPS4-203ENST00000402105 TRIM71Q2Q1W2 868 aaKnown RBP8.69□□□□□ -1.02
HPS4-203ENST00000402105 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.69□□□□□ -1.024e-8■□□□□ 10.8
HPS4-203ENST00000402105 NPAS4Q8IUM7 802 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 OR4N4Q8N0Y3 316 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 PGBD3Q8N328 593 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 CBARPQ8N350 705 aaPredicted RBP8.69□□□□□ -1.02
HPS4-203ENST00000402105 SIMC1Q8NDZ2 872 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 GPR32P1Q8NGA4 272 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 BBS10Q8TAM1 723 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 TEX47Q8TBZ9 253 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 ZFPM2Q8WW38 1151 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 AP3S1Q92572 193 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 QRFPRQ96P65 431 aa8.69□□□□□ -1.02
HPS4-203ENST00000402105 MRPL15Q9P015 296 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms