RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 TMEM69Q5SWH9 247 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 ZNF584Q8IVC4 421 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 ZNF808Q8N4W9 903 aaPredicted RBP13.15□□□□□ -0.3
VAPA-202ENST00000400000 CMASQ8NFW8 434 aaPredicted RBP13.15□□□□□ -0.3
VAPA-202ENST00000400000 FCGR1BQ92637 280 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 S100PBPQ96BU1 408 aa13.15□□□□□ -0.3
VAPA-202ENST00000400000 DOK2O60496 412 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 MALLQ13021 153 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 RSU1Q15404 277 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 OR4C11Q6IEV9 310 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 TDRPQ86YL5 185 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 TEX264Q9Y6I9 313 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 PRSS51A0A1B0GVH4 220 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 ANHXE9PGG2 379 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 H3BNX3 289 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 ZNF888P0CJ79 500 aaPredicted RBP13.14□□□□□ -0.31
VAPA-202ENST00000400000 SCAPQ12770 1279 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 APOFQ13790 326 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 RUNDC3AQ59EK9 446 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 SECISBP2Q96T21 854 aaKnown RBP13.14□□□□□ -0.31
VAPA-202ENST00000400000 MROQ9BYG7 248 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 RARRES3Q9UL19 164 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 SQORQ9Y6N5 450 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 ADGRB1O14514 1584 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 OR52A4PA6NMU1 304 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 FLRT2O43155 660 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 PRICKLE3O43900 615 aaPredicted RBP13.14□□□□□ -0.31
VAPA-202ENST00000400000 C1GALT1C1LP0DN25 315 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 FAM214AQ32MH5 1076 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 HSD17B12Q53GQ0 312 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 LRRC25Q8N386 305 aaPredicted RBP13.14□□□□□ -0.31
VAPA-202ENST00000400000 ZNF675Q8TD23 568 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 FAM71F1Q96KD3 344 aaPredicted RBP13.14□□□□□ -0.31
VAPA-202ENST00000400000 FAM83CQ9BQN1 747 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 G6PC3Q9BUM1 346 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 HEMK1Q9Y5R4 338 aaPredicted RBP13.14□□□□□ -0.31
VAPA-202ENST00000400000 SNAP29O95721 258 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 GKN3PP0CG01 181 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 EEF1A2Q05639 463 aaKnown RBP13.14□□□□□ -0.31
VAPA-202ENST00000400000 TMEM44Q2T9K0 475 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 LACTB2Q53H82 288 aaPredicted RBP13.14□□□□□ -0.31
VAPA-202ENST00000400000 AWAT2Q6E213 333 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 IL17RCQ8NAC3 791 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 SMG8Q8ND04 991 aaKnown RBP13.14□□□□□ -0.31
VAPA-202ENST00000400000 SLC35B2Q8TB61 432 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 MRGPRX2Q96LB1 330 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 ACSL5Q9ULC5 683 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 MYO9BQ13459 2157 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 MYH7P12883 1935 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 A0A1B0GVC2 190 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 LDB3O75112 727 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 RBMXP38159 391 aaKnown RBP13.14□□□□□ -0.31
VAPA-202ENST00000400000 HUS1BQ8NHY5 278 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 TMEM234Q8WY98 164 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 KIAA1191Q96A73 305 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 SUCNR1Q9BXA5 334 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 ADAMTS10Q9H324 1103 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 SYNPO2LQ9H987 977 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 RNF215Q9Y6U7 377 aa13.14□□□□□ -0.31
VAPA-202ENST00000400000 HTR3BO95264 441 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 PFKMP08237 780 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 ETFAP13804 333 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 CEBPBP17676 345 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 RPS3P23396 243 aaKnown RBP eCLIP13.13□□□□□ -0.311e-18■■■□□ 15.9
VAPA-202ENST00000400000 OR56A3Q8NH54 315 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 KRBA1A5PL33 1030 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 HSPB6O14558 160 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 F2P00734 622 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 PRLP01236 227 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 HRGP04196 525 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 SLC15A1P46059 708 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 EPHA4P54764 986 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 GALNT2Q10471 571 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 PAFAH1B3Q15102 231 aaKnown RBP13.13□□□□□ -0.31
VAPA-202ENST00000400000 C6orf132Q5T0Z8 1188 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 HES5Q5TA89 166 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 GPR139Q6DWJ6 353 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 ASRGL1Q7L266 308 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 NEIL3Q8TAT5 605 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 RXFP3Q9NSD7 469 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 ZDHHC18Q9NUE0 388 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 PPP1R14DQ9NXH3 145 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 KLHL9Q9P2J3 617 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 PPP1R3DO95685 299 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 KIAA1614Q5VZ46 1190 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 NANOGP8Q6NSW7 305 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 ZNF550Q7Z398 422 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 PLEKHO2Q8TD55 490 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 GPR22Q99680 433 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 NANOGQ9H9S0 305 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 ERVK13-1Q9NX77 482 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 SRPRAP08240 638 aaKnown RBP13.13□□□□□ -0.31
VAPA-202ENST00000400000 OR4D1Q15615 310 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 VASH1Q7L8A9 365 aaPredicted RBP13.13□□□□□ -0.31
VAPA-202ENST00000400000 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
VAPA-202ENST00000400000 DENND1AQ8TEH3 1009 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 GLYATL2Q8WU03 294 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 SSX3Q99909 188 aa13.13□□□□□ -0.31
VAPA-202ENST00000400000 TMED5Q9Y3A6 229 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms