RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 RUNX3Q13761 415 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 IRF4Q15306 451 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 HDDC3Q8N4P3 179 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ESX1Q8N693 406 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 C11orf16Q9NQ32 467 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 FTSJ1Q9UET6 329 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 KCND3Q9UK17 655 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 STON1Q9Y6Q2 735 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 PRAMEF27A3QJZ7 478 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 OR52A4PA6NMU1 304 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 IDH3BO43837 385 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 POU2F2P09086 479 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 OR12D1P0DN82 309 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ALPPL2P10696 532 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 GRK3P35626 688 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 PTCHD4Q6ZW05 846 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 LACC1Q8IV20 430 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SLC30A8Q8IWU4 369 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 MCFD2Q8NI22 146 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 XAGE5Q8WWM1 108 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 HTRA1Q92743 480 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ZBED6CLQ96FA7 236 aaPredicted RBP17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 COL21A1Q96P44 957 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 IL4I1Q96RQ9 567 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TEX101Q9BY14 249 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 PCBD2Q9H0N5 130 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 OR51E2Q9H255 320 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 KLHL31Q9H511 634 aa17.37■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SNRNP200O75643 2136 aaKnown RBP17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 COL4A3Q01955 1670 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ZAR1LA6NP61 321 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SLC28A2O43868 658 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ALX3O95076 343 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 HSD17B2P37059 387 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SSR2P43308 183 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ZNF793Q6ZN11 406 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TP53I13Q8NBR0 393 aaPredicted RBP17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 QRFPRQ96P65 431 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 DPH7Q9BTV6 452 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 PLA2G2FQ9BZM2 168 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SPTBN5Q9NRC6 3674 aaKnown RBP17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CDK2AP1O14519 115 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SNPHO15079 494 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SCO2O43819 266 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 FRKP42685 505 aaPredicted RBP17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ARMCX4Q5H9R4 360 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 NDUFAF5Q5TEU4 345 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 OR4C11Q6IEV9 310 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SLC46A3Q7Z3Q1 461 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 COMTD1Q86VU5 262 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 KIAA1958Q8N8K9 716 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 OR2A1Q8NGT9 310 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TP53INP1Q96A56 240 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TXNDC15Q96J42 360 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 MAPKAP1Q9BPZ7 522 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TREX2Q9BQ50 279 aaPredicted RBP17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 DSN1Q9H410 356 aa17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ZFR2Q9UPR6 939 aaKnown RBP17.36■□□□□ 0.37
CHRFAM7A-202ENST00000397827 FAM172BPA6NC97 362 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 OR10H3O60404 316 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TPST2O60704 377 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 DBTP11182 482 aaKnown RBP17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ELAVL4P26378 380 aaKnown RBP17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 GPC1P35052 558 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 PRKAG1P54619 331 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 OR5M11Q96RB7 305 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 GLIPR2Q9H4G4 154 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 KCNK12Q9HB15 430 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TRPC4Q9UBN4 977 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SEC14L3Q9UDX4 400 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TBX19O60806 448 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TMCC2O75069 709 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 DDX5P17844 614 aaKnown RBP17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 P2RX3P56373 397 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 PRDX1Q06830 199 aaKnown RBP17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TCEA2Q15560 299 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 C2orf27AQ580R0 203 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 LINC00299Q6ZSB3 139 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CREB3L4Q8TEY5 395 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CAMK1GQ96NX5 476 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 YIPF4Q9BSR8 244 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 OR51I1Q9H343 314 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SEMA3GQ9NS98 782 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 TMCC3Q9ULS5 477 aa17.35■□□□□ 0.37
CHRFAM7A-202ENST00000397827 LRIT2A6NDA9 550 aa17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 C4orf51C9J302 202 aa17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 GNG2P59768 71 aa17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 SLC13A2Q13183 592 aa17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 PIN1Q13526 163 aaPredicted RBP17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 DOC2BQ14184 412 aa17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 MED22Q15528 200 aa17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ZNF750Q32MQ0 723 aa17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 WDR53Q7Z5U6 358 aaPredicted RBP17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CACTIN-AS1Q8N1I8 211 aa17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 COQ7Q99807 217 aa17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 CHCHD6Q9BRQ6 235 aa17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 DDX31Q9H8H2 851 aaKnown RBP17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 ACSL5Q9ULC5 683 aa17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 WBP11Q9Y2W2 641 aaKnown RBP17.34■□□□□ 0.37
CHRFAM7A-202ENST00000397827 DNMT3AQ9Y6K1 912 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms