RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ZNF783Q6ZMS7 281 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 RBM45Q8IUH3 476 aaKnown RBP22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 ZNF431Q8TF32 576 aaPredicted RBP22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 PHF21AQ96BD5 680 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 TM9SF2Q99805 663 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 C5AR2Q9P296 337 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 STOML2Q9UJZ1 356 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 ABT1Q9ULW3 272 aaKnown RBP22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 NRG2O14511 850 aaPredicted RBP22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 TAS2R50P59544 299 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 RGS1Q08116 209 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 C2orf80Q0P641 193 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 CCDC85BQ15834 202 aaPredicted RBP22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 OLIG3Q7RTU3 272 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 COMMD6Q7Z4G1 85 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 CBARPQ8N350 705 aaPredicted RBP22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 MSANTD3Q96H12 275 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 LINC00597Q9H2U6 94 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 RETREG1Q9H6L5 497 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 AUP1Q9Y679 476 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 CDH10Q9Y6N8 788 aa22.77■■□□□ 1.24
CSNK1E-203ENST00000396832 HEPACAM2A8MVW5 462 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 LIM2P55344 173 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 RBBP4Q09028 425 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 ZNF267Q14586 743 aaPredicted RBP22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 SF3A2Q15428 464 aaKnown RBP22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 RNLSQ5VYX0 342 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 CEACAM20Q6UY09 585 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 HSD11B1LQ7Z5J1 315 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 PCSK9Q8NBP7 692 aaKnown RBP22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 C2orf15Q8WU43 125 aaKnown RBP22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 TM9SF4Q92544 642 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 C11orf24Q96F05 449 aaPredicted RBP22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 MTG2Q9H4K7 406 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 KCNE2Q9Y6J6 123 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 TMEM88BA6NKF7 163 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 IMPA1P29218 277 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 AP1S2P56377 157 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 ILKQ13418 452 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 ELOAQ14241 798 aaKnown RBP22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 DEF8Q6ZN54 512 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 ZNF740Q8NDX6 193 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 TMEM163Q8TC26 289 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 SCLYQ96I15 445 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 WFDC6Q9BQY6 131 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 WACQ9BTA9 647 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 CTPS2Q9NRF8 586 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 MGAT4AQ9UM21 535 aa22.76■■□□□ 1.23
CSNK1E-203ENST00000396832 ARRDC5A6NEK1 342 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 ELAVL2Q12926 359 aaKnown RBP22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 HEPACAMQ14CZ8 416 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 SEC23BQ15437 767 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 PLK5Q496M5 336 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 ZNF57Q68EA5 555 aaPredicted RBP22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 RAB8BQ92930 207 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 OTUB1Q96FW1 271 aaPredicted RBP22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 KCNJ15Q99712 375 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 SPNS1Q9H2V7 528 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 HCN2Q9UL51 889 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 ING4Q9UNL4 249 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 FFAR1O14842 300 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 PSIP1O75475 530 aaKnown RBP22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 KLK1P06870 262 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 ASMTP46597 345 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 SOX9P48436 509 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 AGFG1P52594 562 aaKnown RBP22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 MFSD13AQ14CX5 517 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 POU4F3Q15319 338 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 KLHL22Q53GT1 634 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 SPOUT1Q5T280 376 aaKnown RBP22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 GRHL2Q6ISB3 625 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 SZRD1Q7Z422 152 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 OR52I1Q8NGK6 324 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 OR8J1Q8NGP2 316 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 ASZ1Q8WWH4 475 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 PPCDCQ96CD2 204 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 NRTNQ99748 197 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 SLC28A3Q9HAS3 691 aa22.75■■□□□ 1.23
CSNK1E-203ENST00000396832 TRIM77I1YAP6 450 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 SGTAO43765 313 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 OR10H3O60404 316 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 IFNW1P05000 195 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 ATF4P18848 351 aaPredicted RBP22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 IRS1P35568 1242 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 OPRD1P41143 372 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 EVX1P49640 407 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 XKP51811 444 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 ATN1P54259 1190 aaPredicted RBP22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 SNRPD1P62314 119 aaKnown RBP22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 UBE3AQ05086 875 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 GPNMBQ14956 572 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 ZNF284Q2VY69 593 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 CRB2Q5IJ48 1285 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 KCTD20Q7Z5Y7 419 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 ZNF461Q8TAF7 563 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 WRAP53Q9BUR4 548 aaKnown RBP22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 C1GALT1Q9NS00 363 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 CASKO14936 926 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 SH3BP5O60239 455 aa22.74■■□□□ 1.23
CSNK1E-203ENST00000396832 RECKO95980 971 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms