RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 TICAM1Q8IUC6 712 aa16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 C9orf40Q8IXQ3 194 aa16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 LRRC25Q8N386 305 aaPredicted RBP16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 NUBPLQ8TB37 319 aa16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 DOK4Q8TEW6 326 aa16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 THAP3Q8WTV1 239 aaPredicted RBP16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 EXOSC8Q96B26 276 aaKnown RBP16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 CTHRC1Q96CG8 243 aa16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 UTP23Q9BRU9 249 aaKnown RBP16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 CNPPD1Q9BV87 410 aa16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 PNPOQ9NVS9 261 aa16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 MAT2BQ9NZL9 334 aa16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 MYOTQ9UBF9 498 aa16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 PCDHGA10Q9Y5H3 936 aa16.51■□□□□ 0.23
TNFSF13-204ENST00000396542 TRAV17A0A0B4J275 112 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 FCHO1O14526 889 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 SLC28A2O43868 658 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 TBX19O60806 448 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 ITGA10O75578 1167 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 S1PR1P21453 382 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 NT5EP21589 574 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 MAPK1P28482 360 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 CD96P40200 585 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 PPP2R2AP63151 447 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 SMU1Q2TAY7 513 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 ZNF468Q5VIY5 522 aaPredicted RBP16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 MDS2Q8NDY4 140 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 OR5L2Q8NGL0 311 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 CDC26Q8NHZ8 85 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 SUN3Q8TAQ9 357 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 ZNF75CPQ92670 426 aaPredicted RBP16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 TUBGCP3Q96CW5 907 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 ACBD3Q9H3P7 528 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 SLAMF7Q9NQ25 335 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 MIEF1Q9NQG6 463 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 LUZP4Q9P127 313 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 ZNF639Q9UID6 485 aa16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 YARS2Q9Y2Z4 477 aaKnown RBP16.5■□□□□ 0.23
TNFSF13-204ENST00000396542 PRRC2CQ9Y520 2896 aaKnown RBP16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 OR6C76A6NM76 312 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 MYO1GB0I1T2 1018 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 NEURL1O76050 574 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 SSTR4P31391 388 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 ASMTP46597 345 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 HLCSP50747 726 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 TLE1Q04724 770 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 PDE7AQ13946 482 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 ZNF628Q5EBL2 1059 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 RPUSD3Q6P087 351 aaKnown RBP16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 RNF111Q6ZNA4 994 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 C16orf47Q6ZP98 133 aaPredicted RBP16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 LRRC34Q8IZ02 419 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 VWA5B2Q8N398 1253 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 ZNF615Q8N8J6 731 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 OR7G1Q8NGA0 311 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 ZNF675Q8TD23 568 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 TSSK3Q96PN8 268 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 SIGLEC12Q96PQ1 595 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 MEAF6Q9HAF1 191 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 GIMAP4Q9NUV9 329 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 ANKRD10Q9NXR5 420 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 ASIC5Q9NY37 505 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 BAIAP2L1Q9UHR4 511 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 ENTPD4Q9Y227 616 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 PCDHGB6Q9Y5F9 930 aa16.49■□□□□ 0.23
TNFSF13-204ENST00000396542 TTLL8A6PVC2 850 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 PRAMEF2O60811 474 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 OR2J2O76002 312 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 PRPS2P11908 318 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 ST13P50502 369 aaKnown RBP16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 EMX2Q04743 252 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 MAD2L1Q13257 205 aaPredicted RBP16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 EBPQ15125 230 aaKnown RBP16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 OR1C1Q15619 314 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 LTB4RQ15722 352 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 MPEG1Q2M385 716 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 C6orf163Q5TEZ5 329 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 FAM111BQ6SJ93 734 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 ZNF227Q86WZ6 799 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 CCDC116Q8IYX3 515 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 FNDC5Q8NAU1 212 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 MTERF3Q96E29 417 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 RASL10BQ96S79 203 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 C1orf50Q9BV19 199 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 NUF2Q9BZD4 464 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 OR10A5Q9H207 317 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 REEP4Q9H6H4 257 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 AKTIPQ9H8T0 292 aa16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 LIN28AQ9H9Z2 209 aaKnown RBP16.48■□□□□ 0.23
TNFSF13-204ENST00000396542 SLCO1B7G3V0H7 640 aa16.47■□□□□ 0.23
TNFSF13-204ENST00000396542 WWP2O00308 870 aa16.47■□□□□ 0.23
TNFSF13-204ENST00000396542 HDAC3O15379 428 aa16.47■□□□□ 0.23
TNFSF13-204ENST00000396542 CBX7O95931 251 aa16.47■□□□□ 0.23
TNFSF13-204ENST00000396542 PLA2G2AP14555 144 aa16.47■□□□□ 0.23
TNFSF13-204ENST00000396542 MPIP34949 423 aa16.47■□□□□ 0.23
TNFSF13-204ENST00000396542 PTGER1P34995 402 aa16.47■□□□□ 0.23
TNFSF13-204ENST00000396542 CYB561P49447 251 aa16.47■□□□□ 0.23
TNFSF13-204ENST00000396542 SSR4P51571 173 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms