RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 NUP43Q8NFH3 380 aa20.87■□□□□ 0.93
HMGA2-203ENST00000393578 TSPAN14Q8NG11 270 aa20.87■□□□□ 0.93
HMGA2-203ENST00000393578 MAFAQ8NHW3 353 aaPredicted RBP20.87■□□□□ 0.93
HMGA2-203ENST00000393578 MAP3K3Q99759 626 aa20.87■□□□□ 0.93
HMGA2-203ENST00000393578 FAM192AQ9GZU8 254 aa20.87■□□□□ 0.93
HMGA2-203ENST00000393578 STARD5Q9NSY2 213 aa20.87■□□□□ 0.93
HMGA2-203ENST00000393578 TMEM74BQ9NUR3 256 aa20.87■□□□□ 0.93
HMGA2-203ENST00000393578 NTMQ9P121 344 aa20.87■□□□□ 0.93
HMGA2-203ENST00000393578 SH3GLB1Q9Y371 365 aa20.87■□□□□ 0.93
HMGA2-203ENST00000393578 TMEM131Q92545 1883 aa20.87■□□□□ 0.93
HMGA2-203ENST00000393578 CCDC163A0A0D9SF12 145 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 SERPINB7O75635 380 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 SEC24DO94855 1032 aaPredicted RBP20.86■□□□□ 0.93
HMGA2-203ENST00000393578 CD247P20963 164 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 DAPP51397 102 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 KCNC4Q03721 635 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 KCNAB2Q13303 367 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 LAPTM4AQ15012 233 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 DEFB110Q30KQ9 67 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 RNF220Q5VTB9 566 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 CYP4Z1Q86W10 505 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 ARHGEF39Q8N4T4 335 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 ERVMER34-1Q9H9K5 563 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 CYR61O00622 381 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 RPL5P46777 297 aaKnown RBP20.86■□□□□ 0.93
HMGA2-203ENST00000393578 CRISP3P54108 245 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 EPHA4P54764 986 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 LTB4RQ15722 352 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 CYP27C1Q4G0S4 372 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 FAM92BQ6ZTR7 304 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 LGI4Q8N135 537 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 KAT2AQ92830 837 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 RAB33BQ9H082 229 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 ANKHQ9HCJ1 492 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 BCL2L10Q9HD36 194 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 EXD2Q9NVH0 621 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 LYVE1Q9Y5Y7 322 aa20.86■□□□□ 0.93
HMGA2-203ENST00000393578 A0A1B0GTW7 788 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 RHPN2P1A8MT19 583 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 ASNA1O43681 348 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 DNAJB5O75953 348 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 IFNW1P05000 195 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 TFAP2AP05549 437 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 CPMP14384 443 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 ATP6V1B1P15313 513 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 PIGAP37287 484 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 XCR1P46094 333 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 PRTGQ2VWP7 1150 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 KRT73Q86Y46 540 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 CA13Q8N1Q1 262 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 PIK3C3Q8NEB9 887 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 OR5T3Q8NGG3 340 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 APOBEC4Q8WW27 367 aaKnown RBP20.85■□□□□ 0.93
HMGA2-203ENST00000393578 C16orf58Q96GQ5 468 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 YIPF4Q9BSR8 244 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 TESMINQ9Y4I5 508 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 GPC6Q9Y625 555 aaPredicted RBP20.85■□□□□ 0.93
HMGA2-203ENST00000393578 ENPP4Q9Y6X5 453 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 TNFRSF11BO00300 401 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 SLC16A6O15403 523 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 JRKO75564 520 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 FESP07332 822 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 PORP16435 677 aaPredicted RBP20.85■□□□□ 0.93
HMGA2-203ENST00000393578 LIN52Q52LA3 116 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 FAHD1Q6P587 224 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 OR4N5Q8IXE1 308 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 C8orf59Q8N0T1 100 aaPredicted RBP20.85■□□□□ 0.93
HMGA2-203ENST00000393578 BBS10Q8TAM1 723 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 PROX1Q92786 737 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 TANKQ92844 425 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 COL26A1Q96A83 441 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 PIP5K1AQ99755 562 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 YTHDF1Q9BYJ9 559 aaKnown RBP20.85■□□□□ 0.93
HMGA2-203ENST00000393578 SEC14L3Q9UDX4 400 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 EPHA6Q9UF33 1036 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 FAM32AQ9Y421 112 aaKnown RBP20.85■□□□□ 0.93
HMGA2-203ENST00000393578 CSNK1G3Q9Y6M4 447 aa20.85■□□□□ 0.93
HMGA2-203ENST00000393578 LOC100130705A0A1B0GUX0 176 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 A0A1B0GVT2 93 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 TLCD2A6NGC4 264 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 RECKO95980 971 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 ITGAMP11215 1152 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 MAN2A2P49641 1150 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 PUM1Q14671 1186 aaKnown RBP eCLIP20.84■□□□□ 0.93
HMGA2-203ENST00000393578 PRAMEF8Q5VWM4 474 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 PRAMEF7Q5VXH5 474 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 THAP5Q7Z6K1 395 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 COL21A1Q96P44 957 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 ACTRT3Q9BYD9 372 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 DDX18Q9NVP1 670 aaKnown RBP20.84■□□□□ 0.93
HMGA2-203ENST00000393578 PTGFRNQ9P2B2 879 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 KIF17Q9P2E2 1029 aa20.84■□□□□ 0.93
HMGA2-203ENST00000393578 TP53BP1Q12888 1972 aaPredicted RBP20.83■□□□□ 0.93
HMGA2-203ENST00000393578 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.83■□□□□ 0.93
HMGA2-203ENST00000393578 EME2A4GXA9 379 aaPredicted RBP20.83■□□□□ 0.93
HMGA2-203ENST00000393578 TRIM64A6NGJ6 449 aa20.83■□□□□ 0.93
HMGA2-203ENST00000393578 SGK494L7N484 410 aa20.83■□□□□ 0.93
HMGA2-203ENST00000393578 KIF1CO43896 1103 aaKnown RBP20.83■□□□□ 0.93
HMGA2-203ENST00000393578 CTSBP07858 339 aa20.83■□□□□ 0.93
HMGA2-203ENST00000393578 ETS2P15036 469 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms