RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 RNF111Q6ZNA4 994 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 TICAM1Q8IUC6 712 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 CCDC116Q8IYX3 515 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 HORMAD2Q8N7B1 307 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 CNRIP1Q96F85 164 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 BBS4Q96RK4 519 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 EPN3Q9H201 632 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 PNPOQ9NVS9 261 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 MYOTQ9UBF9 498 aa17.65■□□□□ 0.42
PDLIM7-204ENST00000393546 TMEM200CA6NKL6 621 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 OR6C76A6NM76 312 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 ITGA10O75578 1167 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 BCKDHAP12694 445 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 SDC1P18827 310 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 MPIP34949 423 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 ASMTP46597 345 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 ST13P50502 369 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 MLLT10P55197 1068 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 PPP2R2AP63151 447 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 FAM180BQ6P0A1 224 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 SLC29A4Q7RTT9 530 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 TMEM156Q8N614 296 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 FNDC5Q8NAU1 212 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 ZNF75CPQ92670 426 aaPredicted RBP17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 EGLN2Q96KS0 407 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 TSSK3Q96PN8 268 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 BRINP2Q9C0B6 783 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 LIN28AQ9H9Z2 209 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 ANKRD10Q9NXR5 420 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 TAS2R7Q9NYW3 318 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 GIMAP2Q9UG22 337 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 BAIAP2L1Q9UHR4 511 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 PCDHGA10Q9Y5H3 936 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 ZNF462Q96JM2 2506 aa17.64■□□□□ 0.41
PDLIM7-204ENST00000393546 WWP2O00308 870 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 KLF11O14901 512 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 PRAMEF2O60811 474 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 CT62P0C5K7 136 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 PRPS2P11908 318 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 TRHRP34981 398 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 CYB561P49447 251 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 HLCSP50747 726 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 SSR4P51571 173 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 HK2P52789 917 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 SLC37A1P57057 533 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 TLE1Q04724 770 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 FUT7Q11130 342 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 MAD2L1Q13257 205 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 OR1C1Q15619 314 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 INPP5JQ15735 1006 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 SMU1Q2TAY7 513 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 PRICKLE4Q2TBC4 344 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 RPUSD3Q6P087 351 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 VWA5B2Q8N398 1253 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 ADCY4Q8NFM4 1077 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 OR7G1Q8NGA0 311 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 NUBPLQ8TB37 319 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 PPP1R36Q96LQ0 422 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 REEP4Q9H6H4 257 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 LRFN1Q9P244 771 aa17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 EXO1Q9UQ84 846 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 EIF3LQ9Y262 564 aaKnown RBP17.63■□□□□ 0.41
PDLIM7-204ENST00000393546 AKAP10O43572 662 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 VPS4BO75351 444 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 OR2J2O76002 312 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 JUNP05412 331 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 CD46P15529 392 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 SSTR4P31391 388 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 EMX2Q04743 252 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 DUSP2Q05923 314 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 MGAT2Q10469 447 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 CEBPEQ15744 281 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 ZNF766Q5HY98 468 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 ZNF468Q5VIY5 522 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 IL23RQ5VWK5 629 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 SPINK14Q6IE38 97 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 FAM111BQ6SJ93 734 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 C16orf47Q6ZP98 133 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 C9orf40Q8IXQ3 194 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 LIX1Q8N485 282 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 CISD2Q8N5K1 135 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 CLHC1Q8NHS4 586 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 CPT1CQ8TCG5 803 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 DYDC1Q8WWB3 177 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 GFM2Q969S9 779 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 SIGLEC12Q96PQ1 595 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 NUF2Q9BZD4 464 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 OR10A5Q9H207 317 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 AKTIPQ9H8T0 292 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 TRIM45Q9H8W5 580 aaPredicted RBP17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 ZNF446Q9NWS9 450 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 MAT2BQ9NZL9 334 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 MAP10Q9P2G4 905 aa17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 COPG1Q9Y678 874 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-204ENST00000393546 MYO1GB0I1T2 1018 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 SLCO1B7G3V0H7 640 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 LRATO95237 230 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 DDX5P17844 614 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 S1PR1P21453 382 aa17.61■□□□□ 0.41
PDLIM7-204ENST00000393546 NTSP30990 170 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms