RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 DAPP51397 102 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 P2RY4P51582 365 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 BPIFB3P59826 476 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 UBE2IP63279 158 aaKnown RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 PLA2G7Q13093 441 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 RBM39Q14498 530 aaKnown RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 PYCR3Q53H96 274 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ATAT1Q5SQI0 421 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 SLC22A10Q63ZE4 541 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CPZQ66K79 652 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 SLC39A4Q6P5W5 647 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 DOK6Q6PKX4 331 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 Q6ZPB1 254 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 STPG2Q8N412 459 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 OR56B4Q8NH76 319 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 DNAJB8Q8NHS0 232 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 FEVQ99581 238 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TBL1YQ9BQ87 522 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 OCSTAMPQ9BR26 566 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 LHX5Q9H2C1 402 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 LRRN3Q9H3W5 708 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 APOBEC3GQ9HC16 384 aaKnown RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 AIG1Q9NVV5 245 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ARHGAP28Q9P2N2 729 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 AP1M2Q9Y6Q5 423 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF705GA8MUZ8 300 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 H7C1Q1 480 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 J3KR12 359 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 PSMD9O00233 223 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 GPR171O14626 319 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 CHST10O43529 356 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ENTPD6O75354 484 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 IL33O95760 270 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 CSF2RBP32927 897 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 GGT2P36268 569 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 HCCSP53701 268 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 TLE2Q04725 743 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 RCAN2Q14206 197 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 USP39Q53GS9 565 aaKnown RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF678Q5SXM1 525 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ESRP1Q6NXG1 681 aaKnown RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 TMUB2Q71RG4 321 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 FAM86B1Q8N7N1 296 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 BPIFCQ8NFQ6 507 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 TFAP2BQ92481 460 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 TBC1D20Q96BZ9 403 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 SCMH1Q96GD3 660 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 GPR78Q96P69 363 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 RGCCQ9H4X1 137 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ESRP2Q9H6T0 727 aaKnown RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 GORASP2Q9H8Y8 452 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ATP13A1Q9HD20 1204 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 TREM2Q9NZC2 230 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 FAM50BQ9Y247 325 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 A0A1B0GVC2 190 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ABHD14A-ACY1A0A1B0GW23 586 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 CBY3A6NI87 242 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 A6NIN4 97 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 FXYD1O00168 92 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 TLR4O00206 839 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 OR7A17O14581 309 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 SIGLEC5O15389 551 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 PLA2G10O15496 165 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 PRAF2O60831 178 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 GLP2RO95838 553 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ANXA2P07355 339 aaKnown RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 HMBSP08397 361 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 FGF4P08620 206 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 UBBP0CG47 229 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 UBCP0CG48 685 aaKnown RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 SAGP10523 405 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 POU3F4P49335 361 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 SOX4Q06945 474 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 SIGLEC14Q08ET2 396 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 DYRK1AQ13627 763 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ARHGAP40Q5TG30 622 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 SMYD5Q6GMV2 418 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF529Q6P280 563 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ATRAIDQ6UW56 229 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF730Q6ZMV8 503 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 PLPPR4Q7Z2D5 763 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 C12orf40Q86WS4 652 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 MCATQ8IVS2 390 aaKnown RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 NAGSQ8N159 534 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 DUSP18Q8NEJ0 188 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 FAM46DQ8NEK8 389 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 CRYGNQ8WXF5 182 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 BRI3BPQ8WY22 251 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 HSH2DQ96JZ2 352 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 KLHL5Q96PQ7 755 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 TMEM134Q9H6X4 195 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 SIRT5Q9NXA8 310 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 GPR160Q9UJ42 338 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 MAFBQ9Y5Q3 323 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-201ENST00000393077 IRAK3Q9Y616 596 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 NHSQ6T4R5 1651 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 LOC100509620A0A075B734 347 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 IRGMA1A4Y4 181 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 M0R129 80 aa7.28□□□□□ -1.24
VTI1A-201ENST00000393077 GPR37O15354 613 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms