RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CD22P20273 847 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 AGXTP21549 392 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 TSPAN7P41732 249 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 STARD6P59095 220 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 GCNT7Q6ZNI0 430 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 PDZD3Q86UT5 571 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 THOC6Q86W42 341 aaKnown RBP18.01■□□□□ 0.47
CCDC50-202ENST00000392456 RNF175Q8N4F7 328 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 DNAJC11Q9NVH1 559 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 ACSL5Q9ULC5 683 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 KLHL20Q9Y2M5 609 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 SPEGQ15772 3267 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 PRAMEF33A0A0G2JMD5 474 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 CACNB4O00305 520 aaPredicted RBP18.01■□□□□ 0.47
CCDC50-202ENST00000392456 TFECO14948 347 aaPredicted RBP18.01■□□□□ 0.47
CCDC50-202ENST00000392456 CDK1P06493 297 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 EBLN1P0CF75 366 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 YBX1P67809 324 aaKnown RBP18.01■□□□□ 0.47
CCDC50-202ENST00000392456 RPP38P78345 283 aaKnown RBP18.01■□□□□ 0.47
CCDC50-202ENST00000392456 TSTA3Q13630 321 aaPredicted RBP18.01■□□□□ 0.47
CCDC50-202ENST00000392456 GPR153Q6NV75 609 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 TEX261Q6UWH6 196 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 SUSD1Q6UWL2 747 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 ENPP7Q6UWV6 458 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 TSTD1Q8NFU3 115 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 OR52N1Q8NH53 320 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 OR1E3Q8WZA6 343 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 TSACCQ96A04 125 aaPredicted RBP18.01■□□□□ 0.47
CCDC50-202ENST00000392456 GPR174Q9BXC1 333 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 SGK2Q9HBY8 427 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 CCDC167Q9P0B6 97 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 WNT16Q9UBV4 365 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 RAPGEFL1Q9UHV5 662 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 PFDN2Q9UHV9 154 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 SH2B3Q9UQQ2 575 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 CCL27Q9Y4X3 112 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 PCDHGA9Q9Y5G4 932 aaKnown RBP18.01■□□□□ 0.47
CCDC50-202ENST00000392456 U3KQ87 197 aa18.01■□□□□ 0.47
CCDC50-202ENST00000392456 RPS10-NUDT3A0A1W2PQS6 291 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 SLC1A7O00341 560 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 CLDN9O95484 217 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 LDOC1O95751 146 aaPredicted RBP18■□□□□ 0.47
CCDC50-202ENST00000392456 PRR35P0CG20 571 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 SFTPCP11686 197 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 HNRNPA2B1P22626 353 aaKnown RBP18■□□□□ 0.47
CCDC50-202ENST00000392456 HMGCS1Q01581 520 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 IRF3Q14653 427 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 AGKQ53H12 422 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 ZMAT1Q5H9K5 638 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 RD3Q7Z3Z2 195 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 CAMKK1Q8N5S9 505 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 TRMT61AQ96FX7 289 aaKnown RBP18■□□□□ 0.47
CCDC50-202ENST00000392456 INVSQ9Y283 1065 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 PNMA8CA0A1B0GUJ8 204 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 E7EQ34 232 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 PTGES3LE9PB15 166 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 FPGTO14772 594 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 MRASO14807 208 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 NPPAP01160 153 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 GLAP06280 429 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 RRASP10301 218 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 ZP3P21754 424 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 SLC7A2P52569 658 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 ZNF169Q14929 603 aaPredicted RBP18■□□□□ 0.47
CCDC50-202ENST00000392456 POU4F3Q15319 338 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 DEFB119Q8N690 84 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 OR9A1PQ8NGU1 263 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 OR56A3Q8NH54 315 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 CCL4L1Q8NHW4 92 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 NUDT8Q8WV74 236 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 RBPMSQ93062 196 aaKnown RBP18■□□□□ 0.47
CCDC50-202ENST00000392456 SLC19A3Q9BZV2 496 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 MMP28Q9H239 520 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 LDAHQ9H6V9 325 aa18■□□□□ 0.47
CCDC50-202ENST00000392456 CARS2Q9HA77 564 aaKnown RBP18■□□□□ 0.47
CCDC50-202ENST00000392456 KCNE1BA0A087WTH5 132 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 A0A0B4J293 547 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 PRSS38A1L453 326 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 SNRPB2P08579 225 aaKnown RBP17.99■□□□□ 0.47
CCDC50-202ENST00000392456 HLA-DMAP28067 261 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 CHIT1Q13231 466 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 CLCA4Q14CN2 919 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 HKDC1Q2TB90 917 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 C6orf136Q5SQH8 315 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 LCN8Q6JVE9 175 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 FBXO15Q8NCQ5 510 aaPredicted RBP17.99■□□□□ 0.47
CCDC50-202ENST00000392456 MAFAQ8NHW3 353 aaPredicted RBP17.99■□□□□ 0.47
CCDC50-202ENST00000392456 RNF31Q96EP0 1072 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 TEX37Q96LM6 180 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 INSM2Q96T92 566 aaPredicted RBP17.99■□□□□ 0.47
CCDC50-202ENST00000392456 NPAS1Q99742 590 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 WSB2Q9NYS7 404 aaPredicted RBP17.99■□□□□ 0.47
CCDC50-202ENST00000392456 TRAPPC4Q9Y296 219 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 DNMT3AQ9Y6K1 912 aaPredicted RBP17.99■□□□□ 0.47
CCDC50-202ENST00000392456 WDFY4Q6ZS81 3184 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 GOLGA4Q13439 2230 aaKnown RBP17.99■□□□□ 0.47
CCDC50-202ENST00000392456 OR52A4PA6NMU1 304 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 EML2O95834 649 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 IGLV3-19P01714 112 aa17.99■□□□□ 0.47
CCDC50-202ENST00000392456 THRBP10828 461 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms