RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 CHID1Q9BWS9 393 aa13.65□□□□□ -0.22
SYNGR1-204ENST00000381535 VCX3BQ9H321 246 aa13.65□□□□□ -0.22
SYNGR1-204ENST00000381535 TMEM38AQ9H6F2 299 aa13.65□□□□□ -0.22
SYNGR1-204ENST00000381535 FANCEQ9HB96 536 aa13.65□□□□□ -0.22
SYNGR1-204ENST00000381535 ZCCHC3Q9NUD5 404 aaKnown RBP13.65□□□□□ -0.22
SYNGR1-204ENST00000381535 RIMS3Q9UJD0 308 aa13.65□□□□□ -0.22
SYNGR1-204ENST00000381535 RPS6KA6Q9UK32 745 aa13.65□□□□□ -0.22
SYNGR1-204ENST00000381535 IGHV5-10-1A0A0J9YXX1 117 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 MYOCOSA0A1B0GUC4 107 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 BLACEA4D250 179 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 H0YIG0 161 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 ZNF749O43361 778 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 FGF17O60258 216 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 LDB3O75112 727 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 FHP07954 510 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 ANKRD34CP0C6C1 535 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 MSL3P1P0C860 447 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 RAP2AP10114 183 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 FCGR1AP12314 374 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 FASP25445 335 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 MAGEA8P43361 318 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 RPS26P62854 115 aaKnown RBP13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 PRR5P85299 388 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 MAT1AQ00266 395 aaKnown RBP13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 CDK6Q00534 326 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 EEF1A2Q05639 463 aaKnown RBP13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 LTB4RQ15722 352 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 LRRC23Q53EV4 343 aaPredicted RBP13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 HMBOX1Q6NT76 420 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 TNFAIP8L2Q6P589 184 aaPredicted RBP13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 PRR23CQ6ZRP0 262 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 TTLL10Q6ZVT0 673 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 SZRD1Q7Z422 152 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 AMIGO2Q86SJ2 522 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 SLC30A8Q8IWU4 369 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 METTL27Q8N6F8 245 aaPredicted RBP13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 ADCY4Q8NFM4 1077 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 NFKBIDQ8NI38 313 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 ADAMTS18Q8TE60 1221 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 TBC1D20Q96BZ9 403 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 ZNF501Q96CX3 271 aaPredicted RBP13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 PEX11GQ96HA9 241 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 CNDP2Q96KP4 475 aaKnown RBP13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 NDC1Q9BTX1 674 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 ASPSCR1Q9BZE9 553 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 KLHL4Q9C0H6 718 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 SEMA6AQ9H2E6 1030 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 YY1AP1Q9H869 796 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 NDOR1Q9UHB4 597 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 CDC14AQ9UNH5 594 aa13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 SAMD4AQ9UPU9 718 aaKnown RBP13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 MRPS33Q9Y291 106 aaKnown RBP13.64□□□□□ -0.23
SYNGR1-204ENST00000381535 SCN2AQ99250 2005 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 PLOD2O00469 737 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 TPST1O60507 370 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 CTNSO60931 367 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 ZNF682O95780 498 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 OR12D1P0DN82 309 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 ARAFP10398 606 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 CKMT2P17540 419 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 NT5EP21589 574 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 PPP2R1BP30154 601 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 MC3RP41968 323 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 GRK6P43250 576 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 ANXA11P50995 505 aaKnown RBP13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 ARSFP54793 590 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 ACY1Q03154 408 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 ERV3-1Q14264 604 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 SYT16Q17RD7 645 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 LRRC36Q1X8D7 754 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 INTS11Q5TA45 600 aaKnown RBP13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 OGFRL1Q5TC84 451 aaPredicted RBP13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 YOD1Q5VVQ6 348 aaPredicted RBP13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 CCDC80Q76M96 950 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 EIF3MQ7L2H7 374 aaKnown RBP13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 ZNF595Q8IYB9 648 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 OR51Q1Q8NH59 317 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 RHBDD1Q8TEB9 315 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 RAB8BQ92930 207 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 SLC47A1Q96FL8 570 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 GFM1Q96RP9 751 aaKnown RBP13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 YIPF2Q9BWQ6 316 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 OR51I1Q9H343 314 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 MAGIXQ9H6Y5 334 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 A4GALTQ9NPC4 353 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 PRTFDC1Q9NRG1 225 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 FGF21Q9NSA1 209 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 THUMPD1Q9NXG2 353 aaKnown RBP13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 TRPC4Q9UBN4 977 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 LRRC42Q9Y546 428 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 LAMA1P25391 3075 aa13.63□□□□□ -0.23
SYNGR1-204ENST00000381535 C5orf58C9J3I9 102 aa13.62□□□□□ -0.23
SYNGR1-204ENST00000381535 M0QX08 132 aa13.62□□□□□ -0.23
SYNGR1-204ENST00000381535 HMGN4O00479 90 aa13.62□□□□□ -0.23
SYNGR1-204ENST00000381535 CLDN4O14493 209 aa13.62□□□□□ -0.23
SYNGR1-204ENST00000381535 PEX1O43933 1283 aa13.62□□□□□ -0.23
SYNGR1-204ENST00000381535 GCM2O75603 506 aaPredicted RBP13.62□□□□□ -0.23
SYNGR1-204ENST00000381535 CAPNS1P04632 268 aa13.62□□□□□ -0.23
SYNGR1-204ENST00000381535 TFPTP0C1Z6 253 aa13.62□□□□□ -0.23
SYNGR1-204ENST00000381535 ZNF806P0C7X5 589 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms