RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 ATP6V1HQ9UI12 483 aa11.11□□□□□ -0.63
PCNA-201ENST00000379143 EXO1Q9UQ84 846 aaKnown RBP11.11□□□□□ -0.63
PCNA-201ENST00000379143 CYSRT1A8MQ03 144 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 MYO1GB0I1T2 1018 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 MASP2O00187 686 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 CDK2AP1O14519 115 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 SCAMP2O15127 329 aaKnown RBP11.1□□□□□ -0.63
PCNA-201ENST00000379143 PDPK1O15530 556 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 AKAP10O43572 662 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 BCAS2O75934 225 aaPredicted RBP11.1□□□□□ -0.63
PCNA-201ENST00000379143 ZFAND5O76080 213 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 LRATO95237 230 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 DDAH2O95865 285 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 FAM87AP0C7U9 286 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 TROVE2P10155 538 aaKnown RBP eCLIP11.1□□□□□ -0.63
PCNA-201ENST00000379143 ITGAMP11215 1152 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 CLNS1AP54105 237 aaKnown RBP11.1□□□□□ -0.63
PCNA-201ENST00000379143 DIO3P55073 304 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 MAP4K2Q12851 820 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 ZNF267Q14586 743 aaPredicted RBP11.1□□□□□ -0.63
PCNA-201ENST00000379143 RPS6KA2Q15349 733 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 GSTA3Q16772 222 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 DPY19L1Q2PZI1 675 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 PRICKLE4Q2TBC4 344 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 H3F3CQ6NXT2 135 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 ISLR2Q6UXK2 745 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 HSDL2Q6YN16 418 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 CCDC116Q8IYX3 515 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 LGI4Q8N135 537 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 VWA5B2Q8N398 1253 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 OR5L2Q8NGL0 311 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 ZFP28Q8NHY6 868 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 C9orf43Q8TAL5 461 aaPredicted RBP11.1□□□□□ -0.63
PCNA-201ENST00000379143 ZNF675Q8TD23 568 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 BRIX1Q8TDN6 353 aaKnown RBP11.1□□□□□ -0.63
PCNA-201ENST00000379143 NCLNQ969V3 563 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 ERP27Q96DN0 273 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 ZBED6CLQ96FA7 236 aaPredicted RBP11.1□□□□□ -0.63
PCNA-201ENST00000379143 ZNF354BQ96LW1 612 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 CCDC28BQ9BUN5 200 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 CNPPD1Q9BV87 410 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 NUDT9Q9BW91 350 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 DEFB126Q9BYW3 111 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 DPY30Q9C005 99 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 EPS8L2Q9H6S3 715 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 ZNF552Q9H707 407 aaPredicted RBP11.1□□□□□ -0.63
PCNA-201ENST00000379143 TCF7L2Q9NQB0 619 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 AIG1Q9NVV5 245 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 ABI3Q9P2A4 366 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 PTGFRNQ9P2B2 879 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 ZNF451Q9Y4E5 1061 aa11.1□□□□□ -0.63
PCNA-201ENST00000379143 TRBV11-1A0A0K0K1C0 115 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 A0A1W2PS29 197 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 OR6C76A6NM76 312 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 GABRR3A8MPY1 467 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 A8MUI8 341 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 UBDO15205 165 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 IGKV3-11P04433 115 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 CELA2AP08217 269 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 IFI6P09912 130 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 ALDOCP09972 364 aaKnown RBP11.09□□□□□ -0.63
PCNA-201ENST00000379143 IDH3AP50213 366 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 NCBP2P52298 156 aaKnown RBP eCLIP11.09□□□□□ -0.63
PCNA-201ENST00000379143 FUT7Q11130 342 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 MEP1AQ16819 746 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 ZNF750Q32MQ0 723 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 LSM12Q3MHD2 195 aaKnown RBP11.09□□□□□ -0.63
PCNA-201ENST00000379143 CPTPQ5TA50 214 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 ABHD17BQ5VST6 288 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 RNF111Q6ZNA4 994 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 CAMKMTQ7Z624 323 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 RIMKLAQ8IXN7 391 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 SIRT6Q8N6T7 355 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 OR7G1Q8NGA0 311 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 ZNF721Q8TF20 911 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 PSMF1Q92530 271 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 COQ8BQ96D53 544 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 OR52B2Q96RD2 323 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 LMF1Q96S06 567 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 BRINP2Q9C0B6 783 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 NPHS2Q9NP85 383 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 ACSS1Q9NUB1 689 aaPredicted RBP11.09□□□□□ -0.63
PCNA-201ENST00000379143 FGFR1OP2Q9NVK5 253 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 ERVK-19Q9WJR5 959 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 CFL2Q9Y281 166 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 FCHO1O14526 889 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 SOX11P35716 441 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 FRKP42685 505 aaPredicted RBP11.09□□□□□ -0.63
PCNA-201ENST00000379143 MANFP55145 182 aaKnown RBP11.09□□□□□ -0.63
PCNA-201ENST00000379143 SRSF11Q05519 484 aaKnown RBP11.09□□□□□ -0.63
PCNA-201ENST00000379143 MFAP5Q13361 173 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 RAPSNQ13702 412 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 MLC1Q15049 377 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 PDCD4Q53EL6 469 aaKnown RBP11.09□□□□□ -0.63
PCNA-201ENST00000379143 LACTB2Q53H82 288 aaPredicted RBP11.09□□□□□ -0.63
PCNA-201ENST00000379143 ACER2Q5QJU3 275 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 ANKRD26P1Q6NSI1 321 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 FAM180BQ6P0A1 224 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 IGFL2Q6UWQ7 119 aa11.09□□□□□ -0.63
PCNA-201ENST00000379143 DGAT2L6Q6ZPD8 337 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms