RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 THAP7Q9BT49 309 aaPredicted RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 WRAP53Q9BUR4 548 aaKnown RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 PPIEQ9UNP9 301 aaKnown RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 GREB1Q4ZG55 1949 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 A0A1W2PRG6 482 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SGK494L7N484 410 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SSNA1O43805 119 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 MTX2O75431 263 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 ATP6V1E1P36543 226 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 RPS13P62277 151 aaKnown RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 RAE1P78406 368 aaKnown RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 PUM1Q14671 1186 aaKnown RBP eCLIP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 CRB2Q5IJ48 1285 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 LIPJQ5W064 366 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 C12orf73Q69YU5 71 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 GPR139Q6DWJ6 353 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 THOC6Q86W42 341 aaKnown RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 MEX3DQ86XN8 651 aaKnown RBP13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SLC30A8Q8IWU4 369 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 ASB11Q8WXH4 323 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 RFT1Q96AA3 541 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SIPA1Q96FS4 1042 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 RBCK1Q9BYM8 510 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SLC7A5P2Q9GIP4 190 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 OR51J1Q9H342 316 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 ERVMER34-1Q9H9K5 563 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 SRRDQ9UH36 339 aa13.66□□□□□ -0.22
PHTF1-204ENST00000369604 A0A1B0GVM2 712 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 LANCL1O43813 399 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 GJB5O95377 273 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 HRGP04196 525 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 BCHEP06276 602 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 ELK1P19419 428 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 CORO1AP31146 461 aaKnown RBP13.65□□□□□ -0.22
PHTF1-204ENST00000369604 GABRA5P31644 462 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 THPOP40225 353 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 VSX2P58304 361 aaPredicted RBP13.65□□□□□ -0.22
PHTF1-204ENST00000369604 PFN3P60673 137 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 DSTNP60981 165 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 BTG1P62324 171 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 OCLNQ16625 522 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 IER5LQ5T953 404 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 RAET1GQ6H3X3 334 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 IL20RBQ6UXL0 311 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 RBPMSQ93062 196 aaKnown RBP13.65□□□□□ -0.22
PHTF1-204ENST00000369604 ZNF582Q96NG8 517 aaPredicted RBP13.65□□□□□ -0.22
PHTF1-204ENST00000369604 TEFMQ96QE5 360 aaKnown RBP13.65□□□□□ -0.22
PHTF1-204ENST00000369604 REEP4Q9H6H4 257 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 CTPS2Q9NRF8 586 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 LHX3Q9UBR4 397 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 ATP6V1HQ9UI12 483 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 ANKDD1BA6NHY2 528 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 QSOX1O00391 747 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 ELAVL4P26378 380 aaKnown RBP13.65□□□□□ -0.22
PHTF1-204ENST00000369604 CD79BP40259 229 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 DGKGP49619 791 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 GPR33Q49SQ1 333 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 MRPL10Q7Z7H8 261 aaKnown RBP13.65□□□□□ -0.22
PHTF1-204ENST00000369604 ADGRF3Q8IZF5 1079 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 FCRL1Q96LA6 429 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 UROC1Q96N76 676 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 KCNJ15Q99712 375 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 SPRTNQ9H040 489 aaPredicted RBP13.65□□□□□ -0.22
PHTF1-204ENST00000369604 RC3H2Q9HBD1 1191 aaKnown RBP13.65□□□□□ -0.22
PHTF1-204ENST00000369604 EMC7Q9NPA0 242 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 SPATA6Q9NWH7 488 aaPredicted RBP13.65□□□□□ -0.22
PHTF1-204ENST00000369604 A0A0C4DFX4 3053 aa13.65□□□□□ -0.22
PHTF1-204ENST00000369604 TEX13CA0A0J9YWL9 993 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 STK25O00506 426 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 CD160O95971 181 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 ICAM2P13598 275 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 SLC6A1P30531 599 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 TIA1P31483 386 aaKnown RBP eCLIP13.65□□□□□ -0.23
PHTF1-204ENST00000369604 SRP9P49458 86 aaKnown RBP13.65□□□□□ -0.23
PHTF1-204ENST00000369604 MAP2K6P52564 334 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 DUSP4Q13115 394 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 TPBGQ13641 420 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 CLLU1Q5K131 121 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 CDKL4Q5MAI5 379 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 CXorf57Q6NSI4 855 aaKnown RBP13.65□□□□□ -0.23
PHTF1-204ENST00000369604 ACSM5Q6NUN0 579 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 GPR26Q8NDV2 337 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 WDR20Q8TBZ3 569 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 CLP1Q92989 425 aaKnown RBP13.65□□□□□ -0.23
PHTF1-204ENST00000369604 CLEC4AQ9UMR7 237 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 MAB21L2Q9Y586 359 aa13.65□□□□□ -0.23
PHTF1-204ENST00000369604 DSPPQ9NZW4 1301 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 GOLGA4Q13439 2230 aaKnown RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 FZD6O60353 706 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 IFNA16P05015 189 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 GLULP15104 373 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 IRS1P35568 1242 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 SMSP52788 366 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 CRYZQ08257 329 aaKnown RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 PIN1Q13526 163 aaPredicted RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 REEP3Q6NUK4 255 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 PGBD2Q6P3X8 592 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 KIAA1324Q6UXG2 1013 aaKnown RBP13.64□□□□□ -0.23
PHTF1-204ENST00000369604 RTL4Q6ZR62 310 aa13.64□□□□□ -0.23
PHTF1-204ENST00000369604 PLEKHH3Q7Z736 793 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms