RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TAB1Q15750 504 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ELOA3BQ3SY89 546 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC36A3Q495N2 470 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 KIAA0895LQ68EN5 471 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 MZT2BQ6NZ67 158 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 DLEU7Q6UYE1 221 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CHMP1BQ7LBR1 199 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 LUZP2Q86TE4 346 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 GALNT12Q8IXK2 581 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SIX5Q8N196 739 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 MFSD9Q8NBP5 474 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 TOR1AIP2Q8NFQ8 470 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ELOA3Q8NG57 546 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF671Q8TAW3 534 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ENKURQ8TC29 256 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 UBASH3BQ8TF42 649 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 JPH3Q8WXH2 748 aaPredicted RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 TANKQ92844 425 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 UFD1Q92890 307 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF707Q96C28 371 aaPredicted RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 TOE1Q96GM8 510 aaKnown RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 FCRL4Q96PJ5 515 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 MND1Q9BWT6 205 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SGPP1Q9BX95 441 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 ZDHHC5Q9C0B5 715 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 HDHD2Q9H0R4 259 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 OLAHQ9NV23 265 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 CUEDC1Q9NWM3 386 aaPredicted RBP5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 HS3ST3A1Q9Y663 406 aa5.05□□□□□ -1.6
SMNDC1-202ENST00000369603 SH3D21A4FU49 640 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 FAM221BA6H8Z2 402 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF860A6NHJ4 632 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TBX1O43435 398 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 INMTO95050 263 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 DBIP07108 87 aaKnown RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PROS1P07225 676 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CISD3P0C7P0 127 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ARAFP10398 606 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF3P17036 446 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 RPS26P62854 115 aaKnown RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 B4GALNT1Q00973 533 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PTGES3Q15185 160 aaKnown RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PROX2Q3B8N5 592 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC27A4Q6P1M0 643 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 VN1R5Q7Z5H4 357 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 IQCHQ86VS3 1027 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PLXDC1Q8IUK5 500 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 LAS2Q8IYD9 372 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 LILRA2Q8N149 483 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 LILRA3Q8N6C8 439 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 POMGNT2Q8NAT1 580 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZFPM2Q8WW38 1151 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 OMA1Q96E52 524 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 MMABQ96EY8 250 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 MRGPRX3Q96LB0 322 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TEX37Q96LM6 180 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 HS6ST2Q96MM7 605 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PBX4Q9BYU1 374 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TBL1XR1Q9BZK7 514 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 EVA1AQ9H8M9 152 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 IL21RQ9HBE5 538 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PNO1Q9NRX1 252 aaKnown RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 STMN3Q9NZ72 180 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CPNE7Q9UBL6 633 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SEC14L4Q9UDX3 406 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CA14Q9ULX7 337 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ASB1Q9Y576 335 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 BLACEA4D250 179 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TMEM202A6NGA9 273 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CPSF4LA6NMK7 179 aaKnown RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF701M0R085 212 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 RFXAPO00287 272 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SLC1A7O00341 560 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TLX2O43763 284 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 AKAP8O43823 692 aaKnown RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TMCC2O75069 709 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SLITRK5O94991 958 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 GLULP15104 373 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF26P17031 533 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 IL1RNP18510 177 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 AGXTP21549 392 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CERS1P27544 350 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 DPP6P42658 865 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PMS2P3Q13401 168 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 GBX1Q14549 363 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZNF267Q14586 743 aaPredicted RBP5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 SYT16Q17RD7 645 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 MICAQ29983 383 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ARHGAP40Q5TG30 622 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 PRR23CQ6ZRP0 262 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 C12orf40Q86WS4 652 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 KLHL36Q8N4N3 616 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 CDRT4Q8N9R6 151 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 ZFP90Q8TF47 636 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 KAT2AQ92830 837 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TMEM80Q96HE8 168 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 MYADMQ96S97 322 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 BCL7BQ9BQE9 202 aa5.04□□□□□ -1.6
SMNDC1-202ENST00000369603 TSSK6Q9BXA6 273 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms