RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 INHBEP58166 350 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 RING1Q06587 406 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 ZNF791Q3KP31 576 aaPredicted RBP13.32□□□□□ -0.28
SMC5-201ENST00000361138 ZDHHC1Q8WTX9 485 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 SPO11Q9Y5K1 396 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 SLC16A6O15403 523 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 NPR2P20594 1047 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 AGTR1P30556 359 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 POU4F2Q12837 409 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 RPS26P11Q5JNZ5 115 aaPredicted RBP13.32□□□□□ -0.28
SMC5-201ENST00000361138 SLC8B1Q6J4K2 584 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 MAMDC4Q6UXC1 1216 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 BOCQ9BWV1 1114 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 TXNRD2Q9NNW7 524 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 HEBP2Q9Y5Z4 205 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 AXIN1O15169 862 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 SDC1P18827 310 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 PVALBP20472 110 aaPredicted RBP13.32□□□□□ -0.28
SMC5-201ENST00000361138 MLLT11Q13015 90 aaPredicted RBP13.32□□□□□ -0.28
SMC5-201ENST00000361138 PKDCCQ504Y2 493 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 RPL13AP3Q6NVV1 102 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 FUNDC1Q8IVP5 155 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 GLS2Q9UI32 602 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 CXCL14O95715 111 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 GDF6Q6KF10 455 aaPredicted RBP13.32□□□□□ -0.28
SMC5-201ENST00000361138 GET4Q7L5D6 327 aaPredicted RBP13.32□□□□□ -0.28
SMC5-201ENST00000361138 SLC46A3Q7Z3Q1 461 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 C6orf120Q7Z4R8 191 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 LAX1Q8IWV1 398 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 ARHGAP12Q8IWW6 846 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 ANKK1Q8NFD2 765 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 C5orf34Q96MH7 638 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 CENPOQ9BU64 300 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 AP1M2Q9Y6Q5 423 aa13.32□□□□□ -0.28
SMC5-201ENST00000361138 ANKRD36CQ5JPF3 1778 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 OR2A25A4D2G3 310 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 DRD5P21918 477 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 HOXA11P31270 313 aaPredicted RBP13.31□□□□□ -0.28
SMC5-201ENST00000361138 CTBP2P56545 445 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 AIMP2Q13155 320 aaKnown RBP13.31□□□□□ -0.28
SMC5-201ENST00000361138 ZNF792Q3KQV3 632 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 HMGN2P46Q86SG4 172 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 ACBD7Q8N6N7 88 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 TMEM19Q96HH6 336 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 FAM46AQ96IP4 442 aaKnown RBP13.31□□□□□ -0.28
SMC5-201ENST00000361138 ACPTQ9BZG2 426 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 ZNF436Q9C0F3 470 aaPredicted RBP13.31□□□□□ -0.28
SMC5-201ENST00000361138 GJD2Q9UKL4 321 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 C2orf78A6NCI8 922 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 NFKBIEO00221 500 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 LRRC32Q14392 662 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 METTL11BQ5VVY1 283 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 CES4AQ5XG92 561 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 C22orf39Q6P5X5 142 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 POGLUT1Q8NBL1 392 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 ELMOD3Q96FG2 381 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 MBOAT4Q96T53 435 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 AIFM2Q9BRQ8 373 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 DNMT3AQ9Y6K1 912 aaPredicted RBP13.31□□□□□ -0.28
SMC5-201ENST00000361138 H3BSH0 61 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 RNASET2O00584 256 aaKnown RBP13.31□□□□□ -0.28
SMC5-201ENST00000361138 ALDOBP05062 364 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 ZNF14P17017 642 aaPredicted RBP13.31□□□□□ -0.28
SMC5-201ENST00000361138 POLR2IP36954 125 aaKnown RBP13.31□□□□□ -0.28
SMC5-201ENST00000361138 GCGRP47871 477 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 GRIN2CQ14957 1233 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 Q6ZVU0 165 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 ABHD13Q7L211 337 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 C16orf78Q8WTQ4 265 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 THEM6Q8WUY1 208 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 SGCDQ92629 289 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 RBM18Q96H35 190 aaKnown RBP13.31□□□□□ -0.28
SMC5-201ENST00000361138 ZNF583Q96ND8 569 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 NT5DC2Q9H857 520 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 F5H0A9 414 aaPredicted RBP13.31□□□□□ -0.28
SMC5-201ENST00000361138 AHCYP23526 432 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 PPM1AP35813 382 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 RHEBQ15382 184 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 ODF4Q2M2E3 257 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 ENTHD1Q8IYW4 607 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 SMPDL3AQ92484 453 aa13.31□□□□□ -0.28
SMC5-201ENST00000361138 CPPED1Q9BRF8 314 aaPredicted RBP13.31□□□□□ -0.28
SMC5-201ENST00000361138 MTMR11A4FU01 709 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 SLC22A31A6NKX4 558 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 ARHGAP33O14559 1287 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 ANKRD28O15084 1053 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 F2P00734 622 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 MLLT3P42568 568 aaPredicted RBP13.3□□□□□ -0.28
SMC5-201ENST00000361138 GP2P55259 537 aaKnown RBP13.3□□□□□ -0.28
SMC5-201ENST00000361138 ACTA2P62736 377 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 ACTG2P63267 376 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 FKBP1BP68106 108 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 SP3Q02447 781 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 BEST3Q8N1M1 668 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 FBXO8Q9NRD0 319 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMC5-201ENST00000361138 TEX10Q9NXF1 929 aaPredicted RBP13.3□□□□□ -0.28
SMC5-201ENST00000361138 KLHL9Q9P2J3 617 aa13.3□□□□□ -0.28
SMC5-201ENST00000361138 GPN3Q9UHW5 284 aaPredicted RBP13.3□□□□□ -0.28
SMC5-201ENST00000361138 ZNF705EA8MWA4 302 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms