RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 SOX11P35716 441 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 FEN1P39748 380 aaKnown RBP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 CRATP43155 626 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 CCT3P49368 545 aaKnown RBP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 ARSFP54793 590 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 E2F1Q01094 437 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 SLC34A1Q06495 639 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 VMACQ2NL98 169 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 GCNT6Q5T4J0 391 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 IRAK1BP1Q5VVH5 260 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 SAXO2Q658L1 398 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF574Q6ZN55 896 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 TMPRSS9Q7Z410 1059 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 ARHGAP22Q7Z5H3 698 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 RNF130Q86XS8 419 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 C10orf111Q8N326 155 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 OR1L3Q8NH93 324 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 POP5Q969H6 163 aaKnown RBP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 FAM162AQ96A26 154 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF501Q96CX3 271 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 NEURL3Q96EH8 262 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 MMABQ96EY8 250 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 DUS3LQ96G46 650 aaKnown RBP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 CCDC74BQ96LY2 380 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF681Q96N22 645 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 DPH2Q9BQC3 489 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 NDC1Q9BTX1 674 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 CHST8Q9H2A9 424 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 EPS8L2Q9H6S3 715 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 GORASP2Q9H8Y8 452 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 C3orf14Q9HBI5 128 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 FGF21Q9NSA1 209 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 HCN3Q9P1Z3 774 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 STOML1Q9UBI4 398 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 CDC14AQ9UNH5 594 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 RAXQ9Y2V3 346 aa13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 COL27A1Q8IZC6 1860 aaPredicted RBP13.02□□□□□ -0.33
PDLIM5-203ENST00000359265 TCRBV5S2A0A599 114 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 DHRS12A0PJE2 317 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 WASHC1A8K0Z3 465 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 H3BMH7 237 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 H3BNX3 289 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 CYR61O00622 381 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 CASC3O15234 703 aaKnown RBP13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 DNAJB6O75190 326 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 BAG2O95816 211 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 UMPSP11172 480 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 CDK4P11802 303 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 CPMP14384 443 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 SLC7A1P30825 629 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 PCGF2P35227 344 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 MAGEA8P43361 318 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 MVDP53602 400 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 SESN3P58005 492 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 PRR5P85299 388 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 FOLH1Q04609 750 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 DUSP2Q05923 314 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 TP53BP2Q13625 1128 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 BHLHB9Q6PI77 547 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 SZRD1Q7Z422 152 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 SLC30A8Q8IWU4 369 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 CCDC116Q8IYX3 515 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 C11orf65Q8NCR3 313 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 OR56A1Q8NGH5 318 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 OR52E4Q8NGH9 312 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 SUN3Q8TAQ9 357 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 SLC35G5Q96KT7 338 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 ZCCHC3Q9NUD5 404 aaKnown RBP13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 NDOR1Q9UHB4 597 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 ANAPC2Q9UJX6 822 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 PRDM4Q9UKN5 801 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 SRPK3Q9UPE1 567 aa13.01□□□□□ -0.33
PDLIM5-203ENST00000359265 HECTD1Q9ULT8 2610 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 FER1L5A0AVI2 2057 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 DSCR3O14972 297 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 EMC8O43402 210 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 CREG1O75629 220 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 RFPL3O75679 317 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 GPR75O95800 540 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 C1QCP02747 245 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 FHP07954 510 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 BMP2P12643 396 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 ETFAP13804 333 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 PORP16435 677 aaPredicted RBP13□□□□□ -0.33
PDLIM5-203ENST00000359265 GCGRP47871 477 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 ANXA11P50995 505 aaKnown RBP13□□□□□ -0.33
PDLIM5-203ENST00000359265 XKP51811 444 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 DSTNP60981 165 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 RBBP4Q09028 425 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 VEZF1Q14119 521 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF750Q32MQ0 723 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 COX20Q5RI15 118 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 PHF19Q5T6S3 580 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 C6orf120Q7Z4R8 191 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 PACS2Q86VP3 889 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 PTOV1Q86YD1 416 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF595Q8IYB9 648 aa13□□□□□ -0.33
PDLIM5-203ENST00000359265 PQLC1Q8N2U9 271 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms