RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 GPC1P35052 558 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 FRKP42685 505 aaPredicted RBP14.24□□□□□ -0.13
TPM1-206ENST00000358278 UCNP55089 124 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 CBX1P83916 185 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 PCOLCEQ15113 449 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 LTB4RQ15722 352 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 BLOC1S3Q6QNY0 202 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 GK5Q6ZS86 529 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 ZNF551Q7Z340 670 aaPredicted RBP14.24□□□□□ -0.13
TPM1-206ENST00000358278 ANKRD46Q86W74 232 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 FUNDC1Q8IVP5 155 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 PTPMT1Q8WUK0 201 aaPredicted RBP14.24□□□□□ -0.13
TPM1-206ENST00000358278 SPDL1Q96EA4 605 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 WDR77Q9BQA1 342 aaPredicted RBP14.24□□□□□ -0.13
TPM1-206ENST00000358278 TUBB6Q9BUF5 446 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 CNPPD1Q9BV87 410 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 CXorf21Q9HAI6 301 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 ZNF160Q9HCG1 818 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 MAN2B2Q9Y2E5 1009 aa14.24□□□□□ -0.13
TPM1-206ENST00000358278 A0A1W2PQ72 361 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 CCDC154A6NI56 674 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 RNASET2O00584 256 aaKnown RBP14.23□□□□□ -0.13
TPM1-206ENST00000358278 HPP00738 406 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 ITPKBP27987 946 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 ADSLP30566 484 aaPredicted RBP14.23□□□□□ -0.13
TPM1-206ENST00000358278 ZFP36L2P47974 494 aaKnown RBP14.23□□□□□ -0.13
TPM1-206ENST00000358278 TMPRSS3P57727 454 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 KLF10Q13118 480 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 ZNF267Q14586 743 aaPredicted RBP14.23□□□□□ -0.13
TPM1-206ENST00000358278 SPRED3Q2MJR0 410 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 PRICKLE4Q2TBC4 344 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 DGAT2L6Q6ZPD8 337 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 VWA5B2Q8N398 1253 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 DOK4Q8TEW6 326 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 VPS33AQ96AX1 596 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 ART5Q96L15 291 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 LRRC37BQ96QE4 947 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 OR8D2Q9GZM6 311 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 NEUROD4Q9HD90 331 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 COPS7AQ9UBW8 275 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 PCDHGB4Q9UN71 923 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 POLHQ9Y253 713 aa14.23□□□□□ -0.13
TPM1-206ENST00000358278 A0A087WV48 116 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 PRSS51A0A1B0GVH4 220 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 SLC22A2O15244 555 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 C6orf47O95873 294 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 ABCB1P08183 1280 aaPredicted RBP14.22□□□□□ -0.13
TPM1-206ENST00000358278 WNT3P56703 355 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 PHC1P78364 1004 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 MRPS35P82673 323 aaKnown RBP14.22□□□□□ -0.13
TPM1-206ENST00000358278 MAPRE2Q15555 327 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 EXT1Q16394 746 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 MAPKAPK3Q16644 382 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 BTBD16Q32M84 506 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 TMEM107Q6UX40 140 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 CLECL1Q8IZS7 167 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 KDF1Q8NAX2 398 aaPredicted RBP14.22□□□□□ -0.13
TPM1-206ENST00000358278 MORN4Q8NDC4 146 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 B3GNT7Q8NFL0 401 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 SLC2A12Q8TD20 617 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 ZNF675Q8TD23 568 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 OR5P2Q8WZ92 322 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 KAT2AQ92830 837 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 FBXL20Q96IG2 436 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 FER1L6-AS2Q96M78 137 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 RMND5AQ9H871 391 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 CPNE5Q9HCH3 593 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 MAT2BQ9NZL9 334 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 ERVK-19Q9WJR5 959 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 SNX8Q9Y5X2 465 aa14.22□□□□□ -0.13
TPM1-206ENST00000358278 CNTRLQ7Z7A1 2325 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 CPAMD8Q8IZJ3 1885 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 DYTNA2CJ06 578 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 SLITRK5O94991 958 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 CT62P0C5K7 136 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 CAPN3P20807 821 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 MC3RP41968 323 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 RRADP55042 308 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 SLC26A5P58743 744 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 LRRC74AQ0VAA2 488 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 MLC1Q15049 377 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 VPS26BQ4G0F5 336 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 ZNF628Q5EBL2 1059 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 DCAF10Q5QP82 559 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 PLAG1Q6DJT9 500 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 FAM111BQ6SJ93 734 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 MSANTD1Q6ZTZ1 278 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 SZRD1Q7Z422 152 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 CLEC1AQ8NC01 280 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 OR4A15Q8NGL6 344 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 MAGED4Q96JG8 741 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 MYLK2Q9H1R3 596 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 ATMQ13315 3056 aa14.21□□□□□ -0.13
TPM1-206ENST00000358278 ARGFXA6NJG6 315 aa14.21□□□□□ -0.14
TPM1-206ENST00000358278 HRKO00198 91 aa14.21□□□□□ -0.14
TPM1-206ENST00000358278 ANGPT2O15123 496 aa14.21□□□□□ -0.14
TPM1-206ENST00000358278 CPSF4O95639 269 aaKnown RBP14.21□□□□□ -0.14
TPM1-206ENST00000358278 DDAH2O95865 285 aa14.21□□□□□ -0.14
TPM1-206ENST00000358278 SNRPB2P08579 225 aaKnown RBP14.21□□□□□ -0.14
TPM1-206ENST00000358278 ICAM2P13598 275 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms