RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 PGDP52209 483 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 CYLC2Q14093 348 aaPredicted RBP23.7■■□□□ 1.38
SSBP3-202ENST00000357475 MAPKAPK3Q16644 382 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 TRMT12Q53H54 448 aaKnown RBP23.7■■□□□ 1.38
SSBP3-202ENST00000357475 ANXA8L1Q5VT79 327 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 SAMD14Q8IZD0 417 aaPredicted RBP23.7■■□□□ 1.38
SSBP3-202ENST00000357475 OR4A15Q8NGL6 344 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 OR5P2Q8WZ92 322 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 GTF2H4Q92759 462 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 RIT1Q92963 219 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 CCDC115Q96NT0 180 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 SLC25A23Q9BV35 468 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 CXorf36Q9H7Y0 433 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 ADAP2Q9NPF8 381 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 BTNL2Q9UIR0 455 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 IGF2RP11717 2491 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 LAMA5O15230 3695 aa23.7■■□□□ 1.38
SSBP3-202ENST00000357475 NME6O75414 186 aaPredicted RBP23.69■■□□□ 1.38
SSBP3-202ENST00000357475 COX6A1P12074 109 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 DDX5P17844 614 aaKnown RBP23.69■■□□□ 1.38
SSBP3-202ENST00000357475 MC3RP41968 323 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 CPA2P48052 419 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 MLC1Q15049 377 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 PCOLCEQ15113 449 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 ELAVL1Q15717 326 aaKnown RBP23.69■■□□□ 1.38
SSBP3-202ENST00000357475 GTDC1Q4AE62 458 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 REP15Q6BDI9 236 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 OR7G2Q8NG99 324 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 OR11G2Q8NGC1 345 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 RCN3Q96D15 328 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 MAGED4Q96JG8 741 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 MAP10Q9P2G4 905 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 NDUFAF1Q9Y375 327 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 IGHV1-45A0A0A0MS14 117 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 NKX2-8O15522 239 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 GAB1Q13480 694 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 PAPD4Q6PIY7 484 aaKnown RBP23.69■■□□□ 1.38
SSBP3-202ENST00000357475 ERMP1Q7Z2K6 904 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 RP9Q8TA86 221 aaKnown RBP23.69■■□□□ 1.38
SSBP3-202ENST00000357475 FAM117AQ9C073 453 aa23.69■■□□□ 1.38
SSBP3-202ENST00000357475 CCT8L1PA6NM43 557 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 ANGPT2O15123 496 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 DDAH2O95865 285 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 IGHEP01854 428 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 S1PR1P21453 382 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 PTPN6P29350 595 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 GPC1P35052 558 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 DUSP8Q13202 625 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 ZNF267Q14586 743 aaPredicted RBP23.68■■□□□ 1.38
SSBP3-202ENST00000357475 EXOSC7Q15024 291 aaKnown RBP23.68■■□□□ 1.38
SSBP3-202ENST00000357475 MAPRE2Q15555 327 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 C6orf10Q5SRN2 563 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 C6orf89Q6UWU4 347 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 MSANTD1Q6ZTZ1 278 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 MRGPREQ86SM8 312 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 GALNT12Q8IXK2 581 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 NATD1Q8N6N6 113 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 ZFP28Q8NHY6 868 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 TSPEARQ8WU66 669 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 CTHRC1Q96CG8 243 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 ELP4Q96EB1 424 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 PANX1Q96RD7 426 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 CNPPD1Q9BV87 410 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 PAIP1Q9H074 479 aaKnown RBP23.68■■□□□ 1.38
SSBP3-202ENST00000357475 TAS2R9Q9NYW1 312 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 C19orf25Q9UFG5 118 aaPredicted RBP23.68■■□□□ 1.38
SSBP3-202ENST00000357475 LEF1Q9UJU2 399 aaPredicted RBP23.68■■□□□ 1.38
SSBP3-202ENST00000357475 ERVK-19Q9WJR5 959 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 SNX8Q9Y5X2 465 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 LOC400499M0QZD8 3231 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 ACACAQ13085 2346 aa23.68■■□□□ 1.38
SSBP3-202ENST00000357475 UBOX5O94941 541 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 CLPSP04118 112 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 SSTR4P31391 388 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 EIF2S3P41091 472 aaKnown RBP23.67■■□□□ 1.38
SSBP3-202ENST00000357475 BIKQ13323 160 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 ATP1A4Q13733 1029 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 KRT72Q14CN4 511 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 SPRED3Q2MJR0 410 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 FHL5Q5TD97 284 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 NFAM1Q8NET5 270 aaPredicted RBP23.67■■□□□ 1.38
SSBP3-202ENST00000357475 VPS37AQ8NEZ2 397 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 OR5AK3PQ8NH89 298 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 ZNF675Q8TD23 568 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 ITCHQ96J02 903 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 DCBLD2Q96PD2 775 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 PELOQ9BRX2 385 aaKnown RBP23.67■■□□□ 1.38
SSBP3-202ENST00000357475 ZNF700Q9H0M5 742 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 RMND5AQ9H871 391 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 IL1RL2Q9HB29 575 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 MAN2B2Q9Y2E5 1009 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 CLCA3PQ9Y6N3 262 aa23.67■■□□□ 1.38
SSBP3-202ENST00000357475 DYTNA2CJ06 578 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 SAGE2PA6NJ88 616 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 RFXANKO14593 260 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 CELA2AP08217 269 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 T-ENOLP0DO92 83 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 PRKAR1AP10644 381 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 HOXB9P17482 250 aaPredicted RBP23.66■■□□□ 1.38
SSBP3-202ENST00000357475 PRDX6P30041 224 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms