RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 SLC19A3Q9BZV2 496 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 TCEAL2Q9H3H9 227 aaPredicted RBP12.76□□□□□ -0.37
COL6A3-202ENST00000347401 RLIMQ9NVW2 624 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 RNF215Q9Y6U7 377 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 IL1AP01583 271 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 DRD2P14416 443 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 PRSS3P35030 304 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 SLC51AQ86UW1 340 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 PSMG2Q969U7 264 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 C1orf74Q96LT6 269 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 GAL3ST4Q96RP7 486 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 B3GNT5Q9BYG0 378 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 ACTR10Q9NZ32 417 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 CBY1Q9Y3M2 126 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 ABCA1O95477 2261 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 UNC119BA6NIH7 251 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 GJE1A6NN92 205 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 GPR137BO60478 399 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 SIRPB2Q5JXA9 342 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 C22orf42Q6IC83 251 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 KRBA1A5PL33 1030 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 S100A8P05109 93 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 NDUFV2P19404 249 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 NUDT6P53370 316 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 PLP2Q04941 152 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 ZNF674Q2M3X9 581 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 UBE2NLQ5JXB2 153 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 ZNF704Q6ZNC4 412 aaPredicted RBP12.76□□□□□ -0.37
COL6A3-202ENST00000347401 PLA2G15Q8NCC3 412 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 FCRL3Q96P31 734 aaPredicted RBP12.76□□□□□ -0.37
COL6A3-202ENST00000347401 FAM212BQ9NTI7 297 aaPredicted RBP12.76□□□□□ -0.37
COL6A3-202ENST00000347401 MRPS17Q9Y2R5 130 aaKnown RBP12.76□□□□□ -0.37
COL6A3-202ENST00000347401 CACNG2Q9Y698 323 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 ADRB3P13945 408 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 THBS3P49746 956 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 LDB1Q86U70 411 aaPredicted RBP12.76□□□□□ -0.37
COL6A3-202ENST00000347401 METTL4Q8N3J2 472 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 SUMF2Q8NBJ7 301 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 C7orf34Q96L11 122 aa12.76□□□□□ -0.37
COL6A3-202ENST00000347401 TEX10Q9NXF1 929 aaPredicted RBP12.76□□□□□ -0.37
COL6A3-202ENST00000347401 A0A1W2PS29 197 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 FTCDNL1E5RQL4 147 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 UGT2B7P16662 529 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 KLRK1P26718 216 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 BDKRB2P30411 391 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 RAB40BQ12829 278 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 C6orf136Q5SQH8 315 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 DACT2Q5SW24 774 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 TRAM1L1Q8N609 369 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 ZNF417Q8TAU3 575 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 GLYATL1Q969I3 302 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 PLGP00747 810 aaPredicted RBP12.75□□□□□ -0.37
COL6A3-202ENST00000347401 PKLRP30613 574 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 SRPXP78539 464 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 TARBP2Q15633 366 aaKnown RBP12.75□□□□□ -0.37
COL6A3-202ENST00000347401 ITPRIPL2Q3MIP1 535 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 TMEM173Q86WV6 379 aaPredicted RBP12.75□□□□□ -0.37
COL6A3-202ENST00000347401 LFNGQ8NES3 379 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 UPRTQ96BW1 309 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.75□□□□□ -0.37
COL6A3-202ENST00000347401 TLE6Q9H808 572 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 GPRC5BQ9NZH0 403 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 ATG2BQ96BY7 2078 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 MSI1O43347 362 aaKnown RBP12.75□□□□□ -0.37
COL6A3-202ENST00000347401 CLRN1P58418 232 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 GALNT11Q8NCW6 608 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 NPLQ9BXD5 320 aaPredicted RBP12.75□□□□□ -0.37
COL6A3-202ENST00000347401 SLC22A11Q9NSA0 550 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 SALL4Q9UJQ4 1053 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 H3BMQ9 156 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 AKAIN1P0CW23 69 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 RAC2P15153 192 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 GABRR2P28476 465 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 OR1D2P34982 312 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 LURAP1Q96LR2 239 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 COG8Q96MW5 612 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 RNF32Q9H0A6 362 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 TSPAN10Q9H1Z9 355 aaPredicted RBP12.75□□□□□ -0.37
COL6A3-202ENST00000347401 INPPL1O15357 1258 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 CYB5BO43169 146 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 BEND4Q6ZU67 534 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 TMPRSS12Q86WS5 348 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 OR13C3Q8NGS6 347 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 TBX5Q99593 518 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 SLC6A7Q99884 636 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 SCML2Q9UQR0 700 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 HLA-DQB2P05538 268 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 ALAS2P22557 587 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 BMXP51813 675 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 MAP1SQ66K74 1059 aaPredicted RBP12.75□□□□□ -0.37
COL6A3-202ENST00000347401 OR9A1PQ8NGU1 263 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 OR2T4Q8NH00 348 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 ACSL6Q9UKU0 697 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 SNNO75324 88 aaPredicted RBP12.75□□□□□ -0.37
COL6A3-202ENST00000347401 KLK1P06870 262 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 GINS1Q14691 196 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 BATFQ16520 125 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 NOXRED1Q6NXP6 359 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 DEFB128Q7Z7B8 93 aa12.75□□□□□ -0.37
COL6A3-202ENST00000347401 C1orf52Q8N6N3 182 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms