RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 OR2T5Q6IEZ7 315 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 REEP3Q6NUK4 255 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 DGAT2L6Q6ZPD8 337 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 KANSL1Q7Z3B3 1105 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 TMPRSS9Q7Z410 1059 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 ZDHHC13Q8IUH4 622 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 C1orf210Q8IVY1 113 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 GPR32P1Q8NGA4 272 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 OR2T29Q8NH02 315 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 SPPL2AQ8TCT8 520 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 PIGKQ92643 395 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 TCTN2Q96GX1 697 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 SLC35G5Q96KT7 338 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 YY1AP1Q9H869 796 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 TRPC4Q9UBN4 977 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 PHF11Q9UIL8 331 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 SH3GLB1Q9Y371 365 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 CFAP54Q96N23 3096 aa12.76□□□□□ -0.37
CDC42-202ENST00000344548 MAGEA13PA6NCF6 341 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 AGRPO00253 132 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 SEMA7AO75326 666 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 TXNL4AP83876 142 aaKnown RBP12.75□□□□□ -0.37
CDC42-202ENST00000344548 DAG1Q14118 895 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 SLC36A3Q495N2 470 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 SNAP47Q5SQN1 464 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 MANEAQ5SRI9 462 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 OFCC1Q8IZS5 231 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 SDR16C5Q8N3Y7 309 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 ARL10Q8N8L6 244 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 OR4K14Q8NGD5 310 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 GAB3Q8WWW8 586 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 ZG16BQ96DA0 208 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 IER2Q9BTL4 223 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 OSBPL10Q9BXB5 764 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 ROGDIQ9GZN7 287 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 QRSL1Q9H0R6 528 aaKnown RBP12.75□□□□□ -0.37
CDC42-202ENST00000344548 LYRM4Q9HD34 91 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 SOHLH2Q9NX45 425 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 ADPRHL2Q9NX46 363 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 SMPD3Q9NY59 655 aaPredicted RBP12.75□□□□□ -0.37
CDC42-202ENST00000344548 HCN3Q9P1Z3 774 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 TMEFF2Q9UIK5 374 aaPredicted RBP12.75□□□□□ -0.37
CDC42-202ENST00000344548 SEC16AO15027 2179 aa12.75□□□□□ -0.37
CDC42-202ENST00000344548 TGFBR3LH3BV60 316 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 CHST10O43529 356 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 NUDT21O43809 227 aaKnown RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 MITFO75030 526 aaPredicted RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 MFN2O95140 757 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 CPMP14384 443 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 CD1CP29017 333 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 HSPA13P48723 471 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 MAN2A2P49641 1150 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 ALDH3A2P51648 485 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 CHN2P52757 468 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 OR52E8Q6IFG1 317 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 TMEM64Q6YI46 380 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 CYP4Z1Q86W10 505 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 LRRC25Q8N386 305 aaPredicted RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 NUP43Q8NFH3 380 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 OR4D11Q8NGI4 311 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 ZFP28Q8NHY6 868 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 CYGBQ8WWM9 190 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 ANKRD9Q96BM1 317 aaPredicted RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 TREX2Q9BQ50 279 aaPredicted RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 ANKRD60Q9BZ19 345 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 RAD21L1Q9H4I0 556 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 TTC28Q96AY4 2481 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 LY6G6EA0A0G2JKS1 128 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 DPPA5A6NC42 116 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 TLCD2A6NGC4 264 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 A8MU76 341 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 H3BMH7 237 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 E2F6O75461 281 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 CDC123O75794 336 aaPredicted RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 CHRM4P08173 479 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 CT62P0C5K7 136 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 GLB1P16278 677 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 DDX5P17844 614 aaKnown RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 PIGAP37287 484 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 RXRGP48443 463 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 CLCN2P51788 898 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 GTF2A1P52655 376 aaPredicted RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 FOXD4Q12950 439 aaPredicted RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 ZC3H12BQ5HYM0 836 aaKnown RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 PIWIL3Q7Z3Z3 882 aaKnown RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 RBM45Q8IUH3 476 aaKnown RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 ZNF655Q8N720 491 aaPredicted RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 APOBEC4Q8WW27 367 aaKnown RBP12.74□□□□□ -0.37
CDC42-202ENST00000344548 ZNF285Q96NJ3 590 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 NUDT22Q9BRQ3 303 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 AMBRA1Q9C0C7 1298 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 SEMA3GQ9NS98 782 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 PSME2Q9UL46 239 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 ANGPT4Q9Y264 503 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 ZNF451Q9Y4E5 1061 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 U3KQA8 63 aa12.74□□□□□ -0.37
CDC42-202ENST00000344548 HYAL3O43820 417 aaPredicted RBP12.73□□□□□ -0.37
CDC42-202ENST00000344548 SLC28A2O43868 658 aa12.73□□□□□ -0.37
CDC42-202ENST00000344548 SRPX2O60687 465 aaPredicted RBP12.73□□□□□ -0.37
CDC42-202ENST00000344548 ZIC2O95409 532 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms