RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SELENOMQ8WWX9 145 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 SLC6A18Q96N87 628 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 YIPF4Q9BSR8 244 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 IMP3Q9NV31 184 aaKnown RBP17.61■□□□□ 0.41
SMPD1-201ENST00000342245 ELOVL2Q9NXB9 296 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 MBD2Q9UBB5 411 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 BTNL2Q9UIR0 455 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 SLC6A5Q9Y345 797 aa17.61■□□□□ 0.41
SMPD1-201ENST00000342245 TRAV20A0A0B4J274 112 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 G3V3Q6 166 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 LRATO95237 230 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 RASGRP1O95267 797 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 PDYNP01213 254 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 HIST1H2AGP0C0S8 130 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 SMPD1P17405 629 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 HIST1H2ADP20671 130 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 TACR1P25103 407 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 CENPAP49450 140 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 WNT3P56703 355 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 LRRC74AQ0VAA2 488 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 HIST2H2AA3Q6FI13 130 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 PYHIN1Q6K0P9 492 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 ZER1Q7Z7L7 766 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 TMIEQ8NEW7 156 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 RPLP0P6Q8NHW5 317 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 HIST1H2AJQ99878 128 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 SARS2Q9NP81 518 aaKnown RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 FGF20Q9NP95 211 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 MRPS18AQ9NVS2 196 aaKnown RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 BABAM2Q9NXR7 383 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 DTX4Q9Y2E6 619 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 EXOSC1Q9Y3B2 195 aaKnown RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 PCDHB1Q9Y5F3 818 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 ENPP4Q9Y6X5 453 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 PLSCR5A0PG75 271 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 CBX7O95931 251 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 FABP1P07148 127 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 HAPLN1P10915 354 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 DRD2P14416 443 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 RPS12P25398 132 aaKnown RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 AQP1P29972 269 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 LHX1P48742 406 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 HNMTP50135 292 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 BOP1Q14137 746 aaKnown RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 ZNF770Q6IQ21 691 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 USP50Q70EL3 339 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 SLITRK4Q8IW52 837 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 DBF4BQ8NFT6 615 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 NEIL3Q8TAT5 605 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 PAWRQ96IZ0 340 aaKnown RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 ARL5BQ96KC2 179 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 CACNG6Q9BXT2 260 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 NKX6-2Q9C056 277 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 OSGEPL1Q9H4B0 414 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 METTL17Q9H7H0 456 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-201ENST00000342245 LATS2Q9NRM7 1088 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 ZSCAN32Q9NX65 697 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 GJD2Q9UKL4 321 aa17.6■□□□□ 0.41
SMPD1-201ENST00000342245 SERTM1A2A2V5 107 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 C19orf81C9J6K1 198 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 GCM2O75603 506 aaPredicted RBP17.59■□□□□ 0.41
SMPD1-201ENST00000342245 RP2O75695 350 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 KCNJ5P48544 419 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 UGT8Q16880 541 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 GGTA1PQ4G0N0 100 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 WSCD1Q658N2 575 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 MACC1Q6ZN28 852 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 ZNF454Q8N9F8 522 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 COQ8AQ8NI60 647 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 LRRC46Q96FV0 321 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 COPS8Q99627 209 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 SARGQ9BW04 601 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 CSNK1G1Q9HCP0 422 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 DCAF16Q9NXF7 216 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 FBXL2Q9UKC9 423 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 YARS2Q9Y2Z4 477 aaKnown RBP17.59■□□□□ 0.41
SMPD1-201ENST00000342245 CARNS1A5YM72 827 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 ARIH2O95376 493 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 COX7A2P14406 83 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 BTF3P20290 206 aaKnown RBP17.59■□□□□ 0.41
SMPD1-201ENST00000342245 PRKAR1BP31321 381 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 FAM189BP81408 668 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 RAB40BQ12829 278 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 SPDYE7PQ495Y7 208 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 SEZ6L2Q6UXD5 910 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 IKBIPQ70UQ0 350 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 GLT6D1Q7Z4J2 308 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 MRPL10Q7Z7H8 261 aaKnown RBP17.59■□□□□ 0.41
SMPD1-201ENST00000342245 MDGA1Q8NFP4 955 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 OR1M1Q8NGA1 313 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 PCED1BQ96HM7 432 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 LCORQ96JN0 433 aaPredicted RBP17.59■□□□□ 0.41
SMPD1-201ENST00000342245 TCF25Q9BQ70 676 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 POLDIP3Q9BY77 421 aaKnown RBP17.59■□□□□ 0.41
SMPD1-201ENST00000342245 EQTNQ9NQ60 294 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 TMEM248Q9NWD8 314 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 REV1Q9UBZ9 1251 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 MAFFQ9ULX9 164 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 HS3ST4Q9Y661 456 aa17.59■□□□□ 0.41
SMPD1-201ENST00000342245 FAM74A7A6NL05 159 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms