RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 UQCRC1P31930 480 aa21.22■□□□□ 0.99
TRIM28-202ENST00000341753 IFNA8P32881 189 aa21.22■□□□□ 0.99
TRIM28-202ENST00000341753 ZNF33BQ06732 778 aa21.22■□□□□ 0.99
TRIM28-202ENST00000341753 ELOAQ14241 798 aaKnown RBP21.22■□□□□ 0.99
TRIM28-202ENST00000341753 INSL4Q14641 139 aa21.22■□□□□ 0.99
TRIM28-202ENST00000341753 HSD11B1LQ7Z5J1 315 aa21.22■□□□□ 0.99
TRIM28-202ENST00000341753 SLC7A13Q8TCU3 470 aa21.22■□□□□ 0.99
TRIM28-202ENST00000341753 TMEM19Q96HH6 336 aa21.22■□□□□ 0.99
TRIM28-202ENST00000341753 DCLRE1CQ96SD1 692 aaKnown RBP21.22■□□□□ 0.99
TRIM28-202ENST00000341753 TRIM45Q9H8W5 580 aaPredicted RBP21.22■□□□□ 0.99
TRIM28-202ENST00000341753 SEMA3GQ9NS98 782 aa21.22■□□□□ 0.99
TRIM28-202ENST00000341753 C5AR2Q9P296 337 aa21.22■□□□□ 0.99
TRIM28-202ENST00000341753 CCL26Q9Y258 94 aa21.22■□□□□ 0.99
TRIM28-202ENST00000341753 GPR52Q9Y2T5 361 aa21.22■□□□□ 0.99
TRIM28-202ENST00000341753 FAM240BA0A1B0GVZ2 78 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 PSIP1O75475 530 aaKnown RBP21.21■□□□□ 0.99
TRIM28-202ENST00000341753 H1F0P07305 194 aaKnown RBP21.21■□□□□ 0.99
TRIM28-202ENST00000341753 CYP2A6P11509 494 aaPredicted RBP21.21■□□□□ 0.99
TRIM28-202ENST00000341753 ETV3P41162 512 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 WDR5P61964 334 aaKnown RBP21.21■□□□□ 0.99
TRIM28-202ENST00000341753 IL18Q14116 193 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 WSCD2Q2TBF2 565 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 SYT14P1Q58G82 188 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 ZNF628Q5EBL2 1059 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 ACSM5Q6NUN0 579 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 DTX3Q8N9I9 347 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 APOBEC4Q8WW27 367 aaKnown RBP21.21■□□□□ 0.99
TRIM28-202ENST00000341753 TMEM159Q96B96 161 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 MOSPD1Q9UJG1 213 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 KCNE2Q9Y6J6 123 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 ARRDC5A6NEK1 342 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 SLCO2B1O94956 709 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 RAB36O95755 333 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 CPEP16870 476 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 EVI2BP34910 448 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 SOX18P35713 384 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 SNRPD1P62314 119 aaKnown RBP21.21■□□□□ 0.99
TRIM28-202ENST00000341753 FABP5Q01469 135 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 KCNC3Q14003 757 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 LAMTOR1Q6IAA8 161 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 BRAT1Q6PJG6 821 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 GALNT6Q8NCL4 622 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 ABCG4Q9H172 646 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 MIEF1Q9NQG6 463 aa21.21■□□□□ 0.99
TRIM28-202ENST00000341753 CASKO14936 926 aa21.2■□□□□ 0.99
TRIM28-202ENST00000341753 C19orf57Q0VDD7 668 aa21.2■□□□□ 0.99
TRIM28-202ENST00000341753 ZNF730Q6ZMV8 503 aa21.2■□□□□ 0.99
TRIM28-202ENST00000341753 FAM109AQ8N4B1 249 aa21.2■□□□□ 0.99
TRIM28-202ENST00000341753 TMEM145Q8NBT3 493 aa21.2■□□□□ 0.99
TRIM28-202ENST00000341753 MAP6Q96JE9 813 aa21.2■□□□□ 0.99
TRIM28-202ENST00000341753 ZNF717Q9BY31 904 aaPredicted RBP21.2■□□□□ 0.99
TRIM28-202ENST00000341753 MGAT4BQ9UQ53 548 aa21.2■□□□□ 0.99
TRIM28-202ENST00000341753 FKTNO75072 461 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 DGKGP49619 791 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 TBPL1P62380 186 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 GINS1Q14691 196 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 POM121L1PQ3SYA9 428 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 FAM71E1Q6IPT2 247 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 HSDL2Q6YN16 418 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 SLC39A5Q6ZMH5 540 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 C2orf73Q8N5S3 287 aaPredicted RBP21.2■□□□□ 0.98
TRIM28-202ENST00000341753 MTERF3Q96E29 417 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 TAAR2Q9P1P5 351 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 SEC14L5O43304 696 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 TGM5O43548 720 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 LGI1O95970 557 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 CATP04040 527 aaKnown RBP21.2■□□□□ 0.98
TRIM28-202ENST00000341753 TP53P04637 393 aaPredicted RBP21.2■□□□□ 0.98
TRIM28-202ENST00000341753 AVPR1BP47901 424 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 WDR45BQ5MNZ6 344 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 COMTD1Q86VU5 262 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 TCEAL8Q8IYN2 117 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 CXorf40BQ96DE9 158 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 OTUB1Q96FW1 271 aaPredicted RBP21.2■□□□□ 0.98
TRIM28-202ENST00000341753 ZNF582Q96NG8 517 aaPredicted RBP21.2■□□□□ 0.98
TRIM28-202ENST00000341753 C19orf43Q9BQ61 176 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 DMRT3Q9NQL9 472 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 STMN3Q9NZ72 180 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 MAT2BQ9NZL9 334 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 SLC23A1Q9UHI7 598 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 KLHL21Q9UJP4 597 aa21.2■□□□□ 0.98
TRIM28-202ENST00000341753 DIMT1Q9UNQ2 313 aaKnown RBP21.2■□□□□ 0.98
TRIM28-202ENST00000341753 M0R3H8 397 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 NPC1O15118 1278 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 NME6O75414 186 aaPredicted RBP21.19■□□□□ 0.98
TRIM28-202ENST00000341753 ACRP10323 421 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 ITGB8P26012 769 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 IRS1P35568 1242 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 PDE7AQ13946 482 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 UNC5DQ6UXZ4 953 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 B3GLCTQ6Y288 498 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 OR56A3Q8NH54 315 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 ZNF480Q8WV37 535 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 ECHDC3Q96DC8 303 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 METTL2AQ96IZ6 378 aaKnown RBP21.19■□□□□ 0.98
TRIM28-202ENST00000341753 GPA33Q99795 319 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 RIOK2Q9BVS4 552 aaKnown RBP21.19■□□□□ 0.98
TRIM28-202ENST00000341753 NLNQ9BYT8 704 aa21.19■□□□□ 0.98
TRIM28-202ENST00000341753 MKRN2Q9H000 416 aaKnown RBP21.19■□□□□ 0.98
TRIM28-202ENST00000341753 RBFOX1Q9NWB1 397 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms