RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 RGMAQ96B86 450 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 ZNF597Q96LX8 424 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 UCN2Q96RP3 112 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 OCSTAMPQ9BR26 566 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 PELOQ9BRX2 385 aaKnown RBP14.35□□□□□ -0.11
LINC01116-202ENST00000339037 ERVK-6Q9BXR3 956 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 ALG9Q9H6U8 611 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 DMRT3Q9NQL9 472 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 NUDT4Q9NZJ9 180 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 OPTCQ9UBM4 332 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 MTRF1LQ9UGC7 380 aaKnown RBP14.35□□□□□ -0.11
LINC01116-202ENST00000339037 ADGRE2Q9UHX3 823 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 CBLCQ9ULV8 474 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 ERVK-19Q9WJR5 959 aa14.35□□□□□ -0.11
LINC01116-202ENST00000339037 AHRRA9YTQ3 701 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 K7EPI3 171 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 PLPP1O14494 284 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 PRKRAO75569 313 aaKnown RBP14.34□□□□□ -0.11
LINC01116-202ENST00000339037 GSTA2P09210 222 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 HNRNPH2P55795 449 aaKnown RBP14.34□□□□□ -0.11
LINC01116-202ENST00000339037 WNT3P56703 355 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 SLC37A1P57057 533 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 ETF1P62495 437 aaKnown RBP14.34□□□□□ -0.11
LINC01116-202ENST00000339037 DUSP8Q13202 625 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 ZNF267Q14586 743 aaPredicted RBP14.34□□□□□ -0.11
LINC01116-202ENST00000339037 EBPQ15125 230 aaKnown RBP14.34□□□□□ -0.11
LINC01116-202ENST00000339037 RPS6KA2Q15349 733 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 NTRK2Q16620 822 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 SPRED3Q2MJR0 410 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 FBXL19-AS1Q494R0 122 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 TBCELQ5QJ74 424 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 GRHL2Q6ISB3 625 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 SYT10Q6XYQ8 523 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 CYS1Q717R9 158 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 CMC1Q7Z7K0 106 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 MYLK4Q86YV6 388 aaPredicted RBP14.34□□□□□ -0.11
LINC01116-202ENST00000339037 LACC1Q8IV20 430 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 TAGAPQ8N103 731 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 ZCCHC7Q8N3Z6 543 aaKnown RBP14.34□□□□□ -0.11
LINC01116-202ENST00000339037 RNF175Q8N4F7 328 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 PPM1NQ8N819 430 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 TNIP2Q8NFZ5 429 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 DIO2Q92813 273 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 RIT1Q92963 219 aa14.34□□□□□ -0.11
LINC01116-202ENST00000339037 ZNF629Q9UEG4 869 aaPredicted RBP14.34□□□□□ -0.11
LINC01116-202ENST00000339037 FOXD3Q9UJU5 478 aaPredicted RBP14.34□□□□□ -0.11
LINC01116-202ENST00000339037 CNOT11Q9UKZ1 510 aaKnown RBP14.34□□□□□ -0.11
LINC01116-202ENST00000339037 UTP11Q9Y3A2 253 aaKnown RBP14.34□□□□□ -0.11
LINC01116-202ENST00000339037 ANKRD33BA6NCL7 494 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 OR6C76A6NM76 312 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 SUPT3HB4E1H0 165 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 TP53I11O14683 189 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 TRIM3O75382 744 aaPredicted RBP14.33□□□□□ -0.12
LINC01116-202ENST00000339037 SUPT3HO75486 399 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 GPR75O95800 540 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 EPPINO95925 133 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 IL2RAP01589 272 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 SLC35E2BP0CK96 405 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 EPB42P16452 691 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 TACR1P25103 407 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 CEACAM8P31997 349 aaPredicted RBP14.33□□□□□ -0.12
LINC01116-202ENST00000339037 SPRP35270 261 aaPredicted RBP14.33□□□□□ -0.12
LINC01116-202ENST00000339037 TIMP3P35625 211 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 PIK3CBP42338 1070 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 PCDH1Q08174 1060 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 CRYZQ08257 329 aaKnown RBP14.33□□□□□ -0.12
LINC01116-202ENST00000339037 DLG1Q12959 904 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 SLMAPQ14BN4 828 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 FBXW10Q5XX13 1052 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 TMEM198Q66K66 360 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 PAMR1Q6UXH9 720 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 RAPH1Q70E73 1250 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 CAMKMTQ7Z624 323 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 UBTD2Q8WUN7 234 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 MBD6Q96DN6 1003 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 HSPBAP1Q96EW2 488 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 MTERF1Q99551 399 aaKnown RBP14.33□□□□□ -0.12
LINC01116-202ENST00000339037 RAB17Q9H0T7 212 aa14.33□□□□□ -0.12
LINC01116-202ENST00000339037 NINQ8N4C6 2090 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 TUBAL3A6NHL2 446 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 GLOD5A6NK44 160 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 CAPN14A8MX76 684 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 KDM4EB2RXH2 506 aaPredicted RBP14.32□□□□□ -0.12
LINC01116-202ENST00000339037 UBXN8O00124 270 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 KERAO60938 352 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 TRAPPC6AO75865 159 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 NR2F6P10588 404 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 FOSL1P15407 271 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 MAGEA4P43358 317 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 ARFIP1P53367 373 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 CAV1Q03135 178 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 DAZAP2Q15038 168 aaPredicted RBP14.32□□□□□ -0.12
LINC01116-202ENST00000339037 SF3B4Q15427 424 aaKnown RBP eCLIP14.32□□□□□ -0.12
LINC01116-202ENST00000339037 GRTP1Q5TC63 336 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 TMEM64Q6YI46 380 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 ZNF572Q7Z3I7 529 aaPredicted RBP14.32□□□□□ -0.12
LINC01116-202ENST00000339037 TBC1D1Q86TI0 1168 aaPredicted RBP14.32□□□□□ -0.12
LINC01116-202ENST00000339037 ISCA2Q86U28 154 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 PM20D2Q8IYS1 436 aa14.32□□□□□ -0.12
LINC01116-202ENST00000339037 FBF1Q8TES7 1133 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms