RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 DHPSP49366 369 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 B4GALNT1Q00973 533 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 NFATC3Q12968 1075 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ZNF404Q494X3 552 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 SLC35F1Q5T1Q4 408 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 C1orf53Q5VUE5 145 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 OR51G2Q8NGK0 314 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 OR6C2Q9NZP2 312 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ENTPD2Q9Y5L3 495 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 OTOFQ9HC10 1997 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 MCIDASD6RGH6 385 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 B4GAT1O43505 415 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 HCN1O60741 890 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 CDH11P55287 796 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 VLDLRP98155 873 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 TOMM20Q15388 145 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 TPRG1LQ5T0D9 272 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 MLIPQ5VWP3 458 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 GHDCQ8N2G8 530 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 GNPDA2Q8TDQ7 276 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 EZH1Q92800 747 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 CRISPLD2Q9H0B8 497 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 NECTIN3Q9NQS3 549 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 CTSLP07711 333 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 FUT4P22083 530 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 MLLT3P42568 568 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-202ENST00000338368 MICAQ29983 383 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 C11orf88Q6PI97 169 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 PARM1Q6UWI2 310 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 DENND6BQ8NEG7 585 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 PMEPA1Q969W9 287 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 ZDHHC5Q9C0B5 715 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 MARCH7Q9H992 704 aa5.98□□□□□ -1.45
PRKDC-202ENST00000338368 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 H3BMQ9 156 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 K7ESM1 405 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 FXYD1O00168 92 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 RCBTB2O95199 551 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CNR2P34972 360 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 MAP2K4P45985 399 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 QPRTQ15274 297 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 KLHL36Q8N4N3 616 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 FAM86B1Q8N7N1 296 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 LGALS12Q96DT0 336 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 COG8Q96MW5 612 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 COPS7AQ9UBW8 275 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 AKAP8O43823 692 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PTGER1P34995 402 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PCGF2P35227 344 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 MADCAM1Q13477 382 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 AMZ1Q400G9 498 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 LMAN1LQ9HAT1 526 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PNO1Q9NRX1 252 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CEP290O15078 2479 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CCDC182A6NF36 153 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 ELOA3DA6NLF2 546 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CLPXO76031 633 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 GSTM2P28161 218 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 GABRA3P34903 492 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 ELOA3BQ3SY89 546 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 ELOA3Q8NG57 546 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 MS4A8Q9BY19 250 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 MCM3APO60318 1980 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 FAM240BA0A1B0GVZ2 78 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 M0R3H8 397 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 XKRYO14609 159 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PRR35P0CG20 571 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 TFPIP10646 304 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 GPNMBQ14956 572 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 SPHARQ15513 63 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CRTC2Q53ET0 693 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 FRMPD2BQ6IN97 320 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PLET1Q6UQ28 207 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CHTF18Q8WVB6 975 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 UFD1Q92890 307 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 HSPBAP1Q96EW2 488 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 KCTD7Q96MP8 289 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 QSER1Q2KHR3 1735 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CKMT1AP12532 417 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 IL12BP29460 328 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 SRP54P61011 504 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 ADARB1P78563 741 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM164Q5U3C3 297 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 TMEM236Q5W0B7 351 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 HSDL2Q6YN16 418 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 METTL27Q8N6F8 245 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 DUS3LQ96G46 650 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 PTCHD1Q96NR3 888 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 CD180Q99467 661 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 FUNDC2Q9BWH2 189 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 MND1Q9BWT6 205 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 OR8D2Q9GZM6 311 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 LHPPQ9H008 270 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 OLAHQ9NV23 265 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 TRNAU1APQ9NX07 287 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 AP1M2Q9Y6Q5 423 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 SBF1O95248 1867 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 ZFC3H1O60293 1989 aaKnown RBP5.97□□□□□ -1.45
PRKDC-202ENST00000338368 F3P13726 295 aa5.97□□□□□ -1.45
PRKDC-202ENST00000338368 RPL6Q02878 288 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms