RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 PUM1Q14671 1186 aaKnown RBP eCLIP16.83■□□□□ 0.285e-11■■■□□ 17.7
ACTB-201ENST00000331789 RFX4Q33E94 735 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 NADK2Q4G0N4 442 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 ZC3H12BQ5HYM0 836 aaKnown RBP16.83■□□□□ 0.28
ACTB-201ENST00000331789 C8orf59Q8N0T1 100 aaPredicted RBP16.83■□□□□ 0.28
ACTB-201ENST00000331789 C19orf47Q8N9M1 422 aaKnown RBP16.83■□□□□ 0.28
ACTB-201ENST00000331789 AVL9Q8NBF6 648 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 OR52J3Q8NH60 311 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 MOAP1Q96BY2 351 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 ZNF347Q96SE7 839 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 SLC38A3Q99624 504 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 MAP3K3Q99759 626 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 TREX2Q9BQ50 279 aaPredicted RBP16.83■□□□□ 0.28
ACTB-201ENST00000331789 RIBC2Q9H4K1 309 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 C3orf14Q9HBI5 128 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 LYRM4Q9HD34 91 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 ZNF451Q9Y4E5 1061 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 PCDH15Q96QU1 1955 aa16.83■□□□□ 0.28
ACTB-201ENST00000331789 TMEM247A6NEH6 219 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 KIF1CO43896 1103 aaKnown RBP16.82■□□□□ 0.28
ACTB-201ENST00000331789 PABPC4LP0CB38 370 aaKnown RBP16.82■□□□□ 0.28
ACTB-201ENST00000331789 FUT4P22083 530 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 TLX1P31314 330 aaPredicted RBP16.82■□□□□ 0.28
ACTB-201ENST00000331789 XCR1P46094 333 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 CDH12P55289 794 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 ID2Q02363 134 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 MANEAQ5SRI9 462 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 C6orf132Q5T0Z8 1188 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 BHLHB9Q6PI77 547 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 FAM92BQ6ZTR7 304 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 THAP5Q7Z6K1 395 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 MCATQ8IVS2 390 aaKnown RBP16.82■□□□□ 0.28
ACTB-201ENST00000331789 LRRC25Q8N386 305 aaPredicted RBP16.82■□□□□ 0.28
ACTB-201ENST00000331789 TMEM52Q8NDY8 209 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 PIK3C3Q8NEB9 887 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 COL21A1Q96P44 957 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 EQTNQ9NQ60 294 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 EXD2Q9NVH0 621 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 SDK1Q7Z5N4 2213 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 FAM227AF5H4B4 570 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 ADAMDEC1O15204 470 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 SLC16A6O15403 523 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 GALR3O60755 368 aaPredicted RBP16.82■□□□□ 0.28
ACTB-201ENST00000331789 PDE9AO76083 593 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 FESP07332 822 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 CYP4B1P13584 511 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 ITGA2P17301 1181 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 NR1H2P55055 460 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 TPD52P55327 224 aaPredicted RBP16.82■□□□□ 0.28
ACTB-201ENST00000331789 HNRNPKP61978 463 aaKnown RBP eCLIP16.82■□□□□ 0.282e-7■□□□□ 8.8
ACTB-201ENST00000331789 PRR5P85299 388 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 FUT5Q11128 374 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 SIM2Q14190 667 aaPredicted RBP16.82■□□□□ 0.28
ACTB-201ENST00000331789 FAHD1Q6P587 224 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 C17orf82Q86X59 251 aaPredicted RBP16.82■□□□□ 0.28
ACTB-201ENST00000331789 CA13Q8N1Q1 262 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 ATG16L2Q8NAA4 619 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 OR7G2Q8NG99 324 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 OR4C15Q8NGM1 316 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 APOBEC4Q8WW27 367 aaKnown RBP16.82■□□□□ 0.28
ACTB-201ENST00000331789 ZNF607Q96SK3 696 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 YIPF3Q9GZM5 350 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 UCK1Q9HA47 277 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 MS4A12Q9NXJ0 267 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 KIF17Q9P2E2 1029 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 PCDHGA8Q9Y5G5 932 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 ENPP4Q9Y6X5 453 aa16.82■□□□□ 0.28
ACTB-201ENST00000331789 TRIM64A6NGJ6 449 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 C19orf67A6NJJ6 358 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 LMO7DNF2Z398 122 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 SGK494L7N484 410 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 DNAJB5O75953 348 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 CHRM4P08173 479 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 ITGAMP11215 1152 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 CAPZBP47756 277 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 PPM1FP49593 454 aaPredicted RBP16.81■□□□□ 0.28
ACTB-201ENST00000331789 FOXD4Q12950 439 aaPredicted RBP16.81■□□□□ 0.28
ACTB-201ENST00000331789 GANABQ14697 944 aaKnown RBP16.81■□□□□ 0.28
ACTB-201ENST00000331789 MEP1AQ16819 746 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 EXOC3L2Q2M3D2 409 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 CTU2Q2VPK5 515 aaKnown RBP16.81■□□□□ 0.28
ACTB-201ENST00000331789 KLHL35Q6PF15 583 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 HMGN2P46Q86SG4 172 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 UBALD2Q8IYN6 164 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 DNAJC22Q8N4W6 341 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 MIPOL1Q8TD10 442 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 DOK4Q8TEW6 326 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 GIPC3Q8TF64 312 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 OR7D2Q96RA2 312 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 PIP5K1AQ99755 562 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 ING2Q9H160 280 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 KRT84Q9NSB2 600 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 RHCGQ9UBD6 479 aa16.81■□□□□ 0.28
ACTB-201ENST00000331789 GPC6Q9Y625 555 aaPredicted RBP16.81■□□□□ 0.28
ACTB-201ENST00000331789 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.8■□□□□ 0.28
ACTB-201ENST00000331789 LILRA5A6NI73 299 aa16.8■□□□□ 0.28
ACTB-201ENST00000331789 B4GAT1O43505 415 aa16.8■□□□□ 0.28
ACTB-201ENST00000331789 LDB3O75112 727 aa16.8■□□□□ 0.28
ACTB-201ENST00000331789 JRKO75564 520 aa16.8■□□□□ 0.28
ACTB-201ENST00000331789 IFNW1P05000 195 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms