RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 HNRNPCP07910 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
TPM3-206ENST00000330188 NR2F1P10589 423 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 ATP5A1P25705 553 aaKnown RBP13.76□□□□□ -0.21
TPM3-206ENST00000330188 PTGER1P34995 402 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 CRISP3P54108 245 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 ABATP80404 500 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 DUSP2Q05923 314 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 ILKQ13418 452 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 GPR19Q15760 415 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 ARMCX4Q5H9R4 360 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 TMEM64Q6YI46 380 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 FAM92BQ6ZTR7 304 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 OLIG3Q7RTU3 272 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 TBC1D19Q8N5T2 526 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 ACOT4Q8N9L9 421 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 C9orf43Q8TAL5 461 aaPredicted RBP13.76□□□□□ -0.21
TPM3-206ENST00000330188 SUN3Q8TAQ9 357 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 ELSPBP1Q96BH3 223 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 OTUB1Q96FW1 271 aaPredicted RBP13.76□□□□□ -0.21
TPM3-206ENST00000330188 BBS4Q96RK4 519 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 ARMC7Q9H6L4 198 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 KCNK12Q9HB15 430 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 LMCD1Q9NZU5 365 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 NDOR1Q9UHB4 597 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 ATG4BQ9Y4P1 393 aa13.76□□□□□ -0.21
TPM3-206ENST00000330188 M0R3H8 397 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 TLR4O00206 839 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 LINC01565O15544 149 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 ERAL1O75616 437 aaKnown RBP13.75□□□□□ -0.21
TPM3-206ENST00000330188 SOX14O95416 240 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 IGFBP1P08833 259 aaPredicted RBP13.75□□□□□ -0.21
TPM3-206ENST00000330188 PPP2R1BP30154 601 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 MAT2AP31153 395 aaKnown RBP13.75□□□□□ -0.21
TPM3-206ENST00000330188 AHRP35869 848 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 SLC15A1P46059 708 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 KHKP50053 298 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 ADPRHP54922 357 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 TUBA1BP68363 451 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 IFITM3Q01628 133 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 FUT5Q11128 374 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 ZNF750Q32MQ0 723 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 TOR1AIP1Q5JTV8 583 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 PGBD2Q6P3X8 592 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 TUBA1AQ71U36 451 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 CNRIP1Q96F85 164 aaPredicted RBP13.75□□□□□ -0.21
TPM3-206ENST00000330188 CDCA3Q99618 268 aaPredicted RBP13.75□□□□□ -0.21
TPM3-206ENST00000330188 SARGQ9BW04 601 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 CDCA4Q9BXL8 241 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 LMAN2LQ9H0V9 348 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 ANKHQ9HCJ1 492 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 DNAAF2Q9NVR5 837 aaKnown RBP13.75□□□□□ -0.21
TPM3-206ENST00000330188 PCDHGA3Q9Y5H0 932 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 FUOMA2VDF0 154 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 AIFM1O95831 613 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 EPPINO95925 133 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 RPLP0P05388 317 aaKnown RBP13.75□□□□□ -0.21
TPM3-206ENST00000330188 CHRM4P08173 479 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 ALPPL2P10696 532 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 FEN1P39748 380 aaKnown RBP13.75□□□□□ -0.21
TPM3-206ENST00000330188 TNFRSF4P43489 277 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 LIMK1P53667 647 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 PRKAG1P54619 331 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 UGT2B15P54855 530 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 LRRC32Q14392 662 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 SLX4IPQ5VYV7 408 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 C12orf73Q69YU5 71 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 ZNF367Q7RTV3 350 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 KRT73Q86Y46 540 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 TMEM145Q8NBT3 493 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 OR2L5Q8NG80 312 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 BBS10Q8TAM1 723 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 SLC7A13Q8TCU3 470 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 SFXN5Q8TD22 340 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 SCARF2Q96GP6 870 aaPredicted RBP13.75□□□□□ -0.21
TPM3-206ENST00000330188 YIPF4Q9BSR8 244 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 MROQ9BYG7 248 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 PBX4Q9BYU1 374 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 DSN1Q9H410 356 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 SLC25A19Q9HC21 320 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 BCL2L10Q9HD36 194 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 CES1P1Q9UKY3 287 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 REV3LO60673 3130 aa13.75□□□□□ -0.21
TPM3-206ENST00000330188 TICRRQ7Z2Z1 1910 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 EPOPA6NHQ4 379 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 METTL15A6NJ78 407 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 KPNA4O00629 521 aaPredicted RBP13.74□□□□□ -0.21
TPM3-206ENST00000330188 ZW10O43264 779 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 CNOT3O75175 753 aaKnown RBP13.74□□□□□ -0.21
TPM3-206ENST00000330188 ENTPD6O75354 484 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 PIPP12273 146 aaPredicted RBP13.74□□□□□ -0.21
TPM3-206ENST00000330188 CERS1P27544 350 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 MAGEA8P43361 318 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 RGS6P49758 472 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 SMIM11AP58511 58 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 SNRPGP62308 76 aaKnown RBP13.74□□□□□ -0.21
TPM3-206ENST00000330188 PIN1Q13526 163 aaPredicted RBP13.74□□□□□ -0.21
TPM3-206ENST00000330188 OXA1LQ15070 435 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 NIPAL1Q6NVV3 410 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 USP43Q70EL4 1123 aa13.74□□□□□ -0.21
TPM3-206ENST00000330188 SNX29P2Q8IUI4 249 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms