RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DCST2Q5T1A1 773 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 CPT1CQ8TCG5 803 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 TWNKQ96RR1 684 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 TRIB3Q96RU7 358 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 TMEM100Q9NV29 134 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 PRRC2BQ5JSZ5 2229 aaKnown RBP16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 ARPC5O15511 151 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 BRINP1O60477 761 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 FHP07954 510 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 TPT1P13693 172 aaKnown RBP16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 TAS2R31P59538 309 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 MALLQ13021 153 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 TPGS2Q68CL5 300 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 RHEBL1Q8TAI7 183 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 ZNF436Q9C0F3 470 aaPredicted RBP16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 ADH5P11766 374 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 BDKRB2P30411 391 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 BMXP51813 675 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 FAPQ12884 760 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 PMS2P3Q13401 168 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 FGFBP1Q14512 234 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 COQ5Q5HYK3 327 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 LRR1Q96L50 414 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 HS6ST2Q96MM7 605 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 FAM86C1Q9NVL1 165 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 A0A1W2PQL4 384 aaPredicted RBP16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 KCNJ5P48544 419 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 RPP30P78346 268 aaKnown RBP16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 ENPP7Q6UWV6 458 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 VWA5B2Q8N398 1253 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 OR2AP1Q8NGE2 309 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 MRI1Q9BV20 369 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 ATRNL1Q5VV63 1379 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 TLDC1Q6P9B6 456 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 KLBQ86Z14 1044 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 SYT3Q9BQG1 590 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.17■□□□□ 0.183e-7■■■□□ 18.7
SMCHD1-201ENST00000320876 OR12D1P0DN82 309 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 GCGRP47871 477 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 PROX2Q3B8N5 592 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 MINDY1Q8N5J2 469 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 APMAPQ9HDC9 416 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 TDP1Q9NUW8 608 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 RIPK3Q9Y572 518 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 AP1M2Q9Y6Q5 423 aa16.17■□□□□ 0.18
SMCHD1-201ENST00000320876 C17orf113A0A1B0GUU1 675 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 ACVR1BP36896 505 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 LEPRP48357 1165 aaKnown RBP16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 SLC18B1Q6NT16 456 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 OR10T2Q8NGX3 314 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 LILRB5O75023 590 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 MTNR1AP48039 350 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 PSPHP78330 225 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 MLC1Q15049 377 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 MSS51Q4VC12 460 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 RRNAD1Q96FB5 475 aaKnown RBP16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 APOBEC3GQ9HC16 384 aaKnown RBP16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 KLHL13Q9P2N7 655 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 A0A1W2PPK0 400 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 PPP1R11O60927 126 aaPredicted RBP16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 CLDN7O95471 211 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 CSF1P09603 554 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 MOGSQ13724 837 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 C6orf89Q6UWU4 347 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 SVBPQ8N300 66 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 KRTCAP2Q8N6L1 136 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 KCNJ9Q92806 393 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 ZNF486Q96H40 463 aaPredicted RBP16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 COQ4Q9Y3A0 265 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 ASB3Q9Y575 518 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 NAP1L6A6NFF2 107 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 NFATC2Q13469 925 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 DYRK1AQ13627 763 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 PAFAH1B3Q15102 231 aaKnown RBP16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 MLIPQ5VWP3 458 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 AWAT2Q6E213 333 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 HACD2Q6Y1H2 254 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 SCML2Q9UQR0 700 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 B4DGG1 531 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 VNN1O95497 513 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 TGM6O95932 706 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 PTCHD3Q3KNS1 767 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 TMEM225Q6GV28 225 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 SLC9B2Q86UD5 537 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 MRPL41Q8IXM3 137 aaKnown RBP16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 MS4A15Q8N5U1 240 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 A0A1B0GV50 99 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 MAS1P04201 325 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 SLC10A6Q3KNW5 377 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 ACBD7Q8N6N7 88 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 ABHD5Q8WTS1 349 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 NTPCRQ9BSD7 190 aaKnown RBP16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 MRPS14O60783 128 aaKnown RBP16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 PRAF2O60831 178 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 FRZBQ92765 325 aa16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 TEX10Q9NXF1 929 aaPredicted RBP16.16■□□□□ 0.18
SMCHD1-201ENST00000320876 RRAS2P62070 204 aaPredicted RBP16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 HTD2P86397 168 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 NAPRTQ6XQN6 538 aa16.15■□□□□ 0.18
SMCHD1-201ENST00000320876 DCUN1D4Q92564 292 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms