RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SERPINB7O75635 380 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 MFN2O95140 757 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 TNFAIP8O95379 198 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 BMP10O95393 424 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 NSA2O95478 260 aaKnown RBP16.77■□□□□ 0.27
RAB39A-201ENST00000320578 AGR2O95994 175 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 HMGN2P05204 90 aaKnown RBP16.77■□□□□ 0.27
RAB39A-201ENST00000320578 BCHEP06276 602 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 OR12D1P0DN82 309 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 THRBP10828 461 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 EPHA8P29322 1005 aaPredicted RBP16.77■□□□□ 0.27
RAB39A-201ENST00000320578 MAN2A2P49641 1150 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 MAPK10P53779 464 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 ADARB1P78563 741 aaKnown RBP16.77■□□□□ 0.27
RAB39A-201ENST00000320578 SIM1P81133 766 aaPredicted RBP16.77■□□□□ 0.27
RAB39A-201ENST00000320578 KCNC4Q03721 635 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 OTUD3Q5T2D3 398 aaPredicted RBP16.77■□□□□ 0.27
RAB39A-201ENST00000320578 USP51Q70EK9 711 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 PRSS41Q7RTY9 318 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 APLFQ8IW19 511 aaPredicted RBP16.77■□□□□ 0.27
RAB39A-201ENST00000320578 OR2L13Q8N349 312 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 NCSTNQ92542 709 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 AHCYL2Q96HN2 611 aaKnown RBP16.77■□□□□ 0.27
RAB39A-201ENST00000320578 TGM7Q96PF1 710 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 SPATA5L1Q9BVQ7 753 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 BTBD2Q9BX70 525 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 FBXO4Q9UKT5 387 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 RAB23Q9ULC3 237 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 LIPT1Q9Y234 373 aa16.77■□□□□ 0.27
RAB39A-201ENST00000320578 GOLGA4Q13439 2230 aaKnown RBP16.77■□□□□ 0.27
RAB39A-201ENST00000320578 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 IGHV5-51A0A0C4DH38 117 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 DUXAA6NLW8 204 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 ADAMDEC1O15204 470 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 KIF1CO43896 1103 aaKnown RBP16.76■□□□□ 0.27
RAB39A-201ENST00000320578 ETS2P15036 469 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 ALDH4A1P30038 563 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 MC3RP41968 323 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 CRISP3P54108 245 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 GFERP55789 205 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 SQSTM1Q13501 440 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 TSEN54Q7Z6J9 526 aaKnown RBP16.76■□□□□ 0.27
RAB39A-201ENST00000320578 TMEM179BQ7Z7N9 219 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 KRT73Q86Y46 540 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 KMT5CQ86Y97 462 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 TTC29Q8NA56 475 aaPredicted RBP16.76■□□□□ 0.27
RAB39A-201ENST00000320578 SPPL2AQ8TCT8 520 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 ZNF675Q8TD23 568 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 RAB8BQ92930 207 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 GIMAP5Q96F15 307 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 ACTRT3Q9BYD9 372 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 REEP1Q9H902 201 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 PNPLA3Q9NST1 481 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 TMEM74BQ9NUR3 256 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 CALML5Q9NZT1 146 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 NDUFAF4Q9P032 175 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 GPC6Q9Y625 555 aaPredicted RBP16.76■□□□□ 0.27
RAB39A-201ENST00000320578 MN1Q10571 1320 aaPredicted RBP16.76■□□□□ 0.27
RAB39A-201ENST00000320578 THADAQ6YHU6 1953 aa16.76■□□□□ 0.27
RAB39A-201ENST00000320578 A0A0G2JPF8 293 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 A0A1W2PS29 197 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 HNRNPCL2B2RXH8 293 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 HNRNPCL3B7ZW38 293 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 hCG_2039718K7EN88 272 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 ALBP02768 609 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 MSL3P1P0C860 447 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 HNRNPCL4P0DMR1 293 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 CD247P20963 164 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 CNR2P34972 360 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 IST1P53990 364 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 OLR1P78380 273 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 CSTF1Q05048 431 aaKnown RBP16.75■□□□□ 0.27
RAB39A-201ENST00000320578 LASP1Q14847 261 aaKnown RBP16.75■□□□□ 0.27
RAB39A-201ENST00000320578 DEFB110Q30KQ9 67 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 WDR74Q6RFH5 385 aaPredicted RBP16.75■□□□□ 0.27
RAB39A-201ENST00000320578 PRSS42Q7Z5A4 293 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 RABEPKQ7Z6M1 372 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 XAGE5Q8WWM1 108 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 MS4A4EQ96PG1 132 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 ZNF300Q96RE9 604 aaPredicted RBP16.75■□□□□ 0.27
RAB39A-201ENST00000320578 TREX2Q9BQ50 279 aaPredicted RBP16.75■□□□□ 0.27
RAB39A-201ENST00000320578 STARD5Q9NSY2 213 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 VNN3Q9NY84 501 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 TRPC4Q9UBN4 977 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 C3orf18Q9UK00 162 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 C19orf53Q9UNZ5 99 aaPredicted RBP16.75■□□□□ 0.27
RAB39A-201ENST00000320578 HYKKA2RU49 373 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 PRAMEF27A3QJZ7 478 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 ZNF860A6NHJ4 632 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 A6NHS1 94 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 SGK494L7N484 410 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 B4GAT1O43505 415 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 CHST10O43529 356 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 FOXS1O43638 330 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 SLC28A2O43868 658 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 PLOD3O60568 738 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 DNAJB5O75953 348 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 OPN1SWP03999 348 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 NR2F1P10589 423 aa16.75■□□□□ 0.27
RAB39A-201ENST00000320578 ALPPL2P10696 532 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms