RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PAGE2Q7Z2X7 111 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 SLC22A9Q8IVM8 553 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 SIMC1Q8NDZ2 872 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 ADIPOR1Q96A54 375 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 NTNG2Q96CW9 530 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 SPACA9Q96E40 222 aaPredicted RBP18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 ZNF681Q96N22 645 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 KCNA7Q96RP8 456 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 C12orf65Q9H3J6 166 aaKnown RBP18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 HEY2Q9UBP5 337 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 SUCOQ9UBS9 1254 aaKnown RBP18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 ENTPD4Q9Y227 616 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 KLF2Q9Y5W3 355 aaPredicted RBP18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 LIPGQ9Y5X9 500 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 CHCHD2Q9Y6H1 151 aaPredicted RBP18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 MYO9AB2RTY4 2548 aa18.28■□□□□ 0.52
PDZRN3-202ENST00000308537 DCHS2Q6V1P9 2916 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 C1orf226A1L170 272 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 OR6C76A6NM76 312 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 IGHG3P01860 377 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 HSD3B1P14060 373 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 ABOP16442 354 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 HSD3B2P26439 372 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 PIK3R1P27986 724 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 SLCO1A2P46721 670 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 XKP51811 444 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 MAPK12P53778 367 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 LCP2Q13094 533 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 MTFR2Q6P444 385 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 ZYG11AQ6WRX3 759 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 GALNT12Q8IXK2 581 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 MARVELD2Q8N4S9 558 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 SLC15A4Q8N697 577 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 TMEM251Q8N6I4 163 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 OR4K14Q8NGD5 310 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 FAM57AQ8TBR7 257 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 EPS8L3Q8TE67 593 aaKnown RBP18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 PHF10Q8WUB8 498 aaKnown RBP18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 CTHRC1Q96CG8 243 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 FAM173AQ9BQD7 235 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 TNFRSF12AQ9NP84 129 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 SACM1LQ9NTJ5 587 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 TUBA8Q9NY65 449 aaPredicted RBP18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 VPS29Q9UBQ0 182 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 DCDC2Q9UHG0 476 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 ZNF639Q9UID6 485 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 DTX4Q9Y2E6 619 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 TIMM22Q9Y584 194 aa18.27■□□□□ 0.52
PDZRN3-202ENST00000308537 SERTM1A2A2V5 107 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 FAM166BA8MTA8 275 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 E9PLN8 166 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 PLIN3O60664 434 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 GLRA3O75311 464 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 ESRRBO95718 433 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 CELA3AP09093 270 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 AGAP20933 346 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 PTGS2P35354 604 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 PIGAP37287 484 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 PPIAP62937 165 aaKnown RBP18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 CSTF3Q12996 717 aaKnown RBP18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 NTRK2Q16620 822 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 PRICKLE4Q2TBC4 344 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 C3P1Q6ZMU1 363 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 CNPY4Q8N129 248 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 OR10G3Q8NGC4 313 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 METTL6Q8TCB7 284 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 SLC22A8Q8TCC7 542 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 CNRIP1Q96F85 164 aaPredicted RBP18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 APIPQ96GX9 242 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 GAL3ST4Q96RP7 486 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 VKORC1Q9BQB6 163 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 DEFB127Q9H1M4 99 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 MAT2BQ9NZL9 334 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 CNOT11Q9UKZ1 510 aaKnown RBP18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 CSMD2Q7Z408 3487 aa18.26■□□□□ 0.51
PDZRN3-202ENST00000308537 LRRC3CA6NJW4 275 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 PRSS44E7EML9 344 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 DYRK3O43781 588 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 KRT6AP02538 564 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 KRT6BP04259 564 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 ATP1B1P05026 303 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 PRF1P14222 555 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 CRHR1P34998 444 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 KRT6CP48668 564 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 PKNOX1P55347 436 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 TRA2BP62995 288 aaKnown RBP18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 HMGCS1Q01581 520 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 ZNF630Q2M218 657 aaPredicted RBP18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 SP5Q6BEB4 398 aaPredicted RBP18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 FAM180BQ6P0A1 224 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 GALNT18Q6P9A2 607 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 FAM111BQ6SJ93 734 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 TMEM64Q6YI46 380 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 SLC29A4Q7RTT9 530 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 CD163Q86VB7 1156 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 UBLCP1Q8WVY7 318 aaPredicted RBP18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 TP53INP1Q96A56 240 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 OR10A5Q9H207 317 aa18.25■□□□□ 0.51
PDZRN3-202ENST00000308537 IL1RL2Q9HB29 575 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms